Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR4781-201ENST00000585250 76 ntBASIC2.92□□□□□ -1.94
CNTNAP3BQ96NU0 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
CNTNAP3BQ96NU0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CNTNAP3BQ96NU0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CNTNAP3BQ96NU0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 RNU6-1241P-201ENST00000384536 107 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 SNORD77.2-201ENST00000391045 68 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 RNU6-663P-201ENST00000391105 106 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 HMGN2P3-201ENST00000433603 273 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 HMGN2P5-201ENST00000436882 273 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 RNU6-303P-201ENST00000517091 106 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 AC005520.4-201ENST00000604337 90 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3BQ96NU0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CNTNAP3BQ96NU0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CNTNAP3BQ96NU0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 MIR22-201ENST00000362190 85 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 RNU1-58P-201ENST00000362413 163 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 RNU1-70P-201ENST00000362618 164 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-950P-201ENST00000384651 107 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 SNORA67.4-201ENST00000384688 142 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 AC093423.1-201ENST00000440817 142 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 RNU7-156P-201ENST00000517214 74 ntBASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CNTNAP3BQ96NU0 Y_RNA.264-201ENST00000364665 102 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-811P-201ENST00000384069 107 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 MIR136-201ENST00000385207 82 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 SNORA18.5-201ENST00000516616 101 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 RNA5SP168-201ENST00000516642 112 ntBASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3BQ96NU0 MAPK10-266ENST00000641066 6555 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 MIR452-201ENST00000385020 85 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 snoU13.16-201ENST00000459350 104 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 AC005908.1-201ENST00000468701 347 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 MIR3126-201ENST00000577443 74 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 MIR4648-201ENST00000580107 72 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 Z97988.1-201ENST00000637697 135 ntBASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3BQ96NU0 SNORD115-3-201ENST00000363100 82 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 RNA5SP68-201ENST00000363885 119 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 RNY1P13-201ENST00000365030 105 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 SNRPGP12-201ENST00000449481 213 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 SNORD123-201ENST00000459473 70 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 RPS29P11-201ENST00000496507 171 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 MIR6817-201ENST00000615588 66 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 AC022513.1-201ENST00000624512 117 ntBASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTNAP3BQ96NU0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 SNORD67-201ENST00000390833 111 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 RPL23AP6-201ENST00000446637 472 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 AC093850.1-201ENST00000454121 251 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 RNU7-12P-201ENST00000516030 62 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 SNORD14A-201ENST00000606526 91 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 AC067747.1-201ENST00000608026 250 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 AC073476.4-201ENST00000628409 72 ntBASIC2.86□□□□□ -1.95
CNTNAP3BQ96NU0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-208P-201ENST00000362431 107 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 RNU1-91P-201ENST00000364746 163 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 MIR154-201ENST00000385243 84 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 RNU6-205P-201ENST00000390858 107 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 AC244636.1-201ENST00000421152 228 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 HSPE1P9-201ENST00000440046 311 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 AP000753.3-201ENST00000604083 169 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3BQ96NU0 AL034345.1-201ENST00000407768 123 ntBASIC2.84□□□□□ -1.95
CNTNAP3BQ96NU0 HMGN2P23-201ENST00000456759 269 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms