Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 UBL5P2-201ENST00000583788 219 ntBASIC3.37□□□□□ -1.87
RNF25Q96BH1 SNORD92-201ENST00000585078 85 ntBASIC3.37□□□□□ -1.87
RNF25Q96BH1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF25Q96BH1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF25Q96BH1 Z98742.3-201ENST00000418637 326 ntBASIC3.36□□□□□ -1.87
RNF25Q96BH1 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
RNF25Q96BH1 RNA5SP445-201ENST00000515889 115 ntBASIC3.36□□□□□ -1.87
RNF25Q96BH1 SNORA67.4-201ENST00000384688 142 ntBASIC3.35□□□□□ -1.87
RNF25Q96BH1 RNU7-62P-201ENST00000458856 62 ntBASIC3.35□□□□□ -1.87
RNF25Q96BH1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF25Q96BH1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF25Q96BH1 MAPK10-266ENST00000641066 6555 ntBASIC3.34□□□□□ -1.87
RNF25Q96BH1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
RNF25Q96BH1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF25Q96BH1 SNORA11.2-201ENST00000408318 127 ntBASIC3.34□□□□□ -1.87
RNF25Q96BH1 RN7SL293P-201ENST00000481765 281 ntBASIC3.34□□□□□ -1.87
RNF25Q96BH1 RNA5SP385-201ENST00000515947 110 ntBASIC3.34□□□□□ -1.87
RNF25Q96BH1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF25Q96BH1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF25Q96BH1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF25Q96BH1 RNU4-58P-201ENST00000363192 141 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 SNORD41-201ENST00000386967 70 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 AL161935.2-201ENST00000414627 60 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 RNU6-922P-201ENST00000516753 99 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 RNU11-2P-201ENST00000516898 142 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 SNORA31.26-201ENST00000517250 137 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 GHRLOS.1-201ENST00000610995 70 ntBASIC3.33□□□□□ -1.88
RNF25Q96BH1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RNF25Q96BH1 MIR30D-201ENST00000362283 70 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 SNORD77.2-201ENST00000391045 68 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF25Q96BH1 AC245517.4-201ENST00000448601 281 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 RNU6-539P-201ENST00000516665 103 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 AC104996.3-201ENST00000590718 94 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF25Q96BH1 MIR6740-201ENST00000618268 113 ntBASIC3.32□□□□□ -1.88
RNF25Q96BH1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RNF25Q96BH1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF25Q96BH1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF25Q96BH1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF25Q96BH1 MIR377-201ENST00000362145 69 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 SNORD36A-201ENST00000362874 73 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 RNU6-161P-201ENST00000363051 106 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 Y_RNA.283-201ENST00000364798 112 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 AC004223.1-201ENST00000479840 271 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 Y_RNA.681-201ENST00000516445 113 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF25Q96BH1 MIR3200-201ENST00000580767 85 ntBASIC3.31□□□□□ -1.88
RNF25Q96BH1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF25Q96BH1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF25Q96BH1 RNA5SP212-201ENST00000391223 107 ntBASIC3.3□□□□□ -1.88
RNF25Q96BH1 RN7SL274P-201ENST00000492268 272 ntBASIC3.3□□□□□ -1.88
RNF25Q96BH1 AP000942.3-201ENST00000603702 160 ntBASIC3.3□□□□□ -1.88
RNF25Q96BH1 RNU7-10P-201ENST00000607194 63 ntBASIC3.3□□□□□ -1.88
RNF25Q96BH1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF25Q96BH1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF25Q96BH1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF25Q96BH1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF25Q96BH1 RNU1-52P-201ENST00000384190 164 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 Y_RNA.491-201ENST00000384417 107 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 RN7SKP123-201ENST00000410732 291 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 RPL30P7-201ENST00000479312 323 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 SNORA18.5-201ENST00000516616 101 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 MIR3192-201ENST00000584920 77 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 U6.105-201ENST00000637379 88 ntBASIC3.29□□□□□ -1.88
RNF25Q96BH1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RNF25Q96BH1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RNF25Q96BH1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF25Q96BH1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF25Q96BH1 MIR516A2-201ENST00000384888 90 ntBASIC3.28□□□□□ -1.88
RNF25Q96BH1 MIR516A1-201ENST00000385033 90 ntBASIC3.28□□□□□ -1.88
RNF25Q96BH1 UQCRHP3-201ENST00000451503 251 ntBASIC3.28□□□□□ -1.88
RNF25Q96BH1 RNU6-1108P-201ENST00000516308 104 ntBASIC3.28□□□□□ -1.88
RNF25Q96BH1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF25Q96BH1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RNF25Q96BH1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF25Q96BH1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF25Q96BH1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF25Q96BH1 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
RNF25Q96BH1 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
RNF25Q96BH1 RNU7-193P-201ENST00000516723 65 ntBASIC3.27□□□□□ -1.89
RNF25Q96BH1 MIR3064-201ENST00000581130 66 ntBASIC3.27□□□□□ -1.89
RNF25Q96BH1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
RNF25Q96BH1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF25Q96BH1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF25Q96BH1 SNORA3A-201ENST00000364113 130 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 MIR1302-7-201ENST00000408841 72 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 RNU6-1194P-201ENST00000516208 104 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 RNU6-523P-201ENST00000516304 54 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 RNU2-19P-201ENST00000517288 84 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF25Q96BH1 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
RNF25Q96BH1 AL359851.1-201ENST00000569460 4997 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms