Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 snoU13.11-201ENST00000459219 104 ntBASIC2.85□□□□□ -1.95
NEDD1Q8NHV4 MIR4435-1-201ENST00000582552 80 ntBASIC2.85□□□□□ -1.95
NEDD1Q8NHV4 MIR664A-201ENST00000626086 82 ntBASIC2.85□□□□□ -1.95
NEDD1Q8NHV4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD1Q8NHV4 SNORD114-10-201ENST00000363409 72 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 Y_RNA.508-201ENST00000384502 114 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 RNU6-540P-201ENST00000384622 101 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MIR520H-201ENST00000385126 88 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 HSPE1P9-201ENST00000440046 311 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 AC234781.5-201ENST00000508429 271 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 RNU6-1108P-201ENST00000516308 104 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MTND5P40-201ENST00000559945 246 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MIR3169-201ENST00000578032 83 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MIR4484-201ENST00000582855 83 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MIR6715A-201ENST00000615929 79 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 AC243994.1-201ENST00000618627 109 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 MIR1291-201ENST00000627649 87 ntBASIC2.84□□□□□ -1.95
NEDD1Q8NHV4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 RNA5SP493-201ENST00000364115 91 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 MTND4LP19-201ENST00000403051 166 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 RNU2-59P-201ENST00000410482 191 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 RNA5SP508-201ENST00000411327 119 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 CKS1BP2-201ENST00000497342 240 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 RNU6-70P-201ENST00000516438 60 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 RNA5SP168-201ENST00000516642 112 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 SNORD53-201ENST00000579969 78 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 MIR4796-201ENST00000580742 81 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD1Q8NHV4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 AC131280.1-202ENST00000624067 4211 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 RNU6-649P-201ENST00000384463 107 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 RNU6-160P-201ENST00000384591 107 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 RNU4-83P-201ENST00000410863 133 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 AC008413.1-201ENST00000511864 177 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 SNORA28-201ENST00000606769 126 ntBASIC2.82□□□□□ -1.96
NEDD1Q8NHV4 HSBP1P2-201ENST00000299671 229 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 Y_RNA.98-201ENST00000363109 102 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 RNU6-800P-201ENST00000384473 103 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 MIR635-201ENST00000384830 98 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 MIR561-201ENST00000385216 97 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 RNU4-53P-201ENST00000410828 140 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 AL355297.2-201ENST00000604792 129 ntBASIC2.81□□□□□ -1.96
NEDD1Q8NHV4 SNORA68.1-201ENST00000364537 132 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 SNORA25B-201ENST00000365507 128 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 SNORD38.2-201ENST00000384470 69 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNA5SP292-201ENST00000390974 118 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-447P-201ENST00000410293 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-1118P-201ENST00000410382 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-1076P-201ENST00000410397 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-355P-201ENST00000410427 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-791P-201ENST00000410467 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-705P-201ENST00000410601 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-1100P-201ENST00000410691 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-860P-201ENST00000410860 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-1217P-201ENST00000411276 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 RNU6-785P-201ENST00000411324 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 AC005908.1-201ENST00000468701 347 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 U6.90-201ENST00000614007 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 U6.70-201ENST00000620287 104 ntBASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.8□□□□□ -1.96
NEDD1Q8NHV4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 RNA5SP24-201ENST00000516478 95 ntBASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 AP001362.1-201ENST00000625165 124 ntBASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD1Q8NHV4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 RNU6-471P-201ENST00000383944 106 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 MIR136-201ENST00000385207 82 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 SNORA3.2-201ENST00000408221 125 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 RNU6-602P-201ENST00000411155 105 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 RPL23AP6-201ENST00000446637 472 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 AC093850.1-201ENST00000454121 251 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 SNORD123-201ENST00000459473 70 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 RNU7-12P-201ENST00000516030 62 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 U6.111-201ENST00000636093 83 ntBASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD1Q8NHV4 RNY1P13-201ENST00000365030 105 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 MIR526A1-201ENST00000384897 85 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 RNU6-587P-201ENST00000391282 106 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 RNU6-380P-201ENST00000410207 107 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms