Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNU11-2P-201ENST00000516898 142 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 MIR3192-201ENST00000584920 77 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 AL161756.2-201ENST00000604597 246 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 TRDV1-202ENST00000621643 102 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.63□□□□□ -1.67
NCBP3Q53F19 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NCBP3Q53F19 SNORA73.2-201ENST00000364946 201 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 U8.9-201ENST00000365667 134 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 MIR449B-201ENST00000384995 97 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 RNU6-360P-201ENST00000390944 104 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 AC093578.1-201ENST00000415219 368 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 AL606490.4-201ENST00000423117 127 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 PRSS3P4-201ENST00000453323 162 ntBASIC4.62□□□□□ -1.67
NCBP3Q53F19 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NCBP3Q53F19 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NCBP3Q53F19 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NCBP3Q53F19 SNORA25.3-201ENST00000363205 127 ntBASIC4.61□□□□□ -1.67
NCBP3Q53F19 MT-TF-201ENST00000387314 71 ntBASIC4.61□□□□□ -1.67
NCBP3Q53F19 MIR8053-201ENST00000613344 75 ntBASIC4.61□□□□□ -1.67
NCBP3Q53F19 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NCBP3Q53F19 RNU6-614P-201ENST00000384369 107 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 SNORD100-201ENST00000408573 76 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 RNA5SP100-201ENST00000410903 110 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 RNA5SP59-201ENST00000410922 110 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 SUMO1P4-201ENST00000429430 302 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 MIR2113-201ENST00000459007 91 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 TRAJ51-201ENST00000504127 63 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 SNORA31.17-201ENST00000516953 127 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 5S_rRNA.3-201ENST00000517021 110 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 5S_rRNA.19-201ENST00000612131 110 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 uc_338.6-201ENST00000613544 171 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 U6.59-201ENST00000615686 107 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 5S_rRNA.18-201ENST00000621941 110 ntBASIC4.6□□□□□ -1.67
NCBP3Q53F19 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NCBP3Q53F19 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NCBP3Q53F19 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.6□□□□□ -1.67
NCBP3Q53F19 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.59□□□□□ -1.67
NCBP3Q53F19 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
NCBP3Q53F19 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.59□□□□□ -1.67
NCBP3Q53F19 RNU1-51P-201ENST00000365345 176 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 Y_RNA.606-201ENST00000410579 103 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 RNA5SP344-201ENST00000411081 104 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 AC004965.1-201ENST00000413033 213 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 RPL23AP83-201ENST00000434984 473 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 RNU2-19P-201ENST00000517288 84 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 MIR5089-201ENST00000580047 84 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 U1.36-201ENST00000620684 176 ntBASIC4.59□□□□□ -1.67
NCBP3Q53F19 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.59□□□□□ -1.68
NCBP3Q53F19 AC073325.2-201ENST00000339545 159 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 SNORD115-22-201ENST00000364456 82 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 Y_RNA.536-201ENST00000384621 113 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 SNORD93-201ENST00000408813 74 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 SNORA70.18-201ENST00000516696 98 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 AL627230.6-201ENST00000611129 280 ntBASIC4.58□□□□□ -1.68
NCBP3Q53F19 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCBP3Q53F19 U8.13-201ENST00000390842 128 ntBASIC4.57□□□□□ -1.68
NCBP3Q53F19 SNORA9.3-201ENST00000516383 129 ntBASIC4.57□□□□□ -1.68
NCBP3Q53F19 MIR4511-201ENST00000582784 87 ntBASIC4.57□□□□□ -1.68
NCBP3Q53F19 AC103706.3-201ENST00000636297 85 ntBASIC4.57□□□□□ -1.68
NCBP3Q53F19 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
NCBP3Q53F19 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCBP3Q53F19 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.56□□□□□ -1.68
NCBP3Q53F19 MIR101-2-201ENST00000362195 79 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 RNU6-664P-201ENST00000362381 107 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 RNU6-1216P-201ENST00000362590 107 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 RNU6-403P-201ENST00000363163 104 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 RNU6-525P-201ENST00000363685 104 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 SNORD101-201ENST00000384027 73 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 RNA5SP270-201ENST00000411361 118 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 MIR4425-201ENST00000580572 84 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 MIR4696-201ENST00000581431 70 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 DLEU2_3.1-201ENST00000620005 73 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 AL035425.3-201ENST00000564206 4996 ntBASIC4.56□□□□□ -1.68
NCBP3Q53F19 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NCBP3Q53F19 AL365361.1-201ENST00000566942 3481 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 RNA5SP259-201ENST00000365541 109 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 Y_RNA.588-201ENST00000391254 102 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 RPS29P4-201ENST00000414733 161 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.55□□□□□ -1.68
NCBP3Q53F19 AC003982.1-202ENST00000469928 248 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 Y_RNA.809-201ENST00000516058 95 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.55□□□□□ -1.68
NCBP3Q53F19 GTF3AP2-201ENST00000557014 266 ntBASIC4.55□□□□□ -1.68
NCBP3Q53F19 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCBP3Q53F19 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NCBP3Q53F19 MIR633-201ENST00000384821 98 ntBASIC4.54□□□□□ -1.68
NCBP3Q53F19 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NCBP3Q53F19 SNORD17-201ENST00000390930 237 ntBASIC4.54□□□□□ -1.68
NCBP3Q53F19 MIR887-201ENST00000401258 79 ntBASIC4.54□□□□□ -1.68
NCBP3Q53F19 AC097510.1-201ENST00000510945 133 ntBASIC4.54□□□□□ -1.68
NCBP3Q53F19 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NCBP3Q53F19 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCBP3Q53F19 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCBP3Q53F19 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NCBP3Q53F19 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NCBP3Q53F19 SNORD41-201ENST00000386967 70 ntBASIC4.53□□□□□ -1.68
NCBP3Q53F19 RNA5SP385-201ENST00000515947 110 ntBASIC4.53□□□□□ -1.68
NCBP3Q53F19 MIR2115-201ENST00000516657 100 ntBASIC4.53□□□□□ -1.68
NCBP3Q53F19 RNU6-922P-201ENST00000516753 99 ntBASIC4.53□□□□□ -1.68
NCBP3Q53F19 RNVU1-4-201ENST00000612985 164 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms