Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC107016.2-201ENST00000547968 190 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AC090897.1-201ENST00000580909 226 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 MIR8055-201ENST00000610739 97 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AP006437.1-201ENST00000641440 3685 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 Y_RNA.264-201ENST00000364665 102 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 RNU6-630P-201ENST00000391258 106 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 MIR4536-1-201ENST00000583537 88 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.11□□□□□ -1.91
CTC1Q2NKJ3 Y_RNA.12-201ENST00000362393 112 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 RNU6-330P-201ENST00000363015 107 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 RNU6-132P-201ENST00000383863 107 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 MIR452-201ENST00000385020 85 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 HSPE1P9-201ENST00000440046 311 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 RPL23AP6-201ENST00000446637 472 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 SNORD123-201ENST00000459473 70 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 AC133485.1-201ENST00000567176 124 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 AP000753.3-201ENST00000604083 169 ntBASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
CTC1Q2NKJ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 RNY1P13-201ENST00000365030 105 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 SNORA72.6-201ENST00000384520 129 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 MIR633-201ENST00000384821 98 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 SNORD90-201ENST00000391145 111 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 RPS29P6-201ENST00000438196 145 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 HSPE1P24-201ENST00000450782 238 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 AC026271.5-201ENST00000577873 130 ntBASIC3.09□□□□□ -1.91
CTC1Q2NKJ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 Y_RNA.354-201ENST00000365448 111 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 SNORA67.4-201ENST00000384688 142 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 MIR196B-201ENST00000384852 84 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 AC092628.1-201ENST00000436250 252 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 AL513328.1-201ENST00000446460 224 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 RNU6-850P-201ENST00000516934 103 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 MIR3064-201ENST00000581130 66 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 AC104996.3-201ENST00000590718 94 ntBASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.08□□□□□ -1.92
CTC1Q2NKJ3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 RNA5SP493-201ENST00000364115 91 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 AC244636.1-201ENST00000421152 228 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 SNRPGP12-201ENST00000449481 213 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 snoU13.16-201ENST00000459350 104 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 RPS27P21-201ENST00000486977 252 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 MIR4500-201ENST00000579472 76 ntBASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTC1Q2NKJ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 SNORA38-201ENST00000363946 132 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 Y_RNA.491-201ENST00000384417 107 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 MIR9-1-201ENST00000385198 89 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 MIR1262-201ENST00000408276 93 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 AC027119.1-201ENST00000440877 241 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 SNORD14A-201ENST00000606526 91 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 AC007318.2-201ENST00000620999 243 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 MIR7843-201ENST00000622274 79 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 MIR6733-201ENST00000635723 61 ntBASIC3.06□□□□□ -1.92
CTC1Q2NKJ3 MIR337-201ENST00000362281 93 ntBASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 Y_RNA.537-201ENST00000384626 109 ntBASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 AL034345.1-201ENST00000407768 123 ntBASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 AC092427.1-202ENST00000430569 476 ntBASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTC1Q2NKJ3 SNORA25.4-201ENST00000363666 124 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 RNU6-205P-201ENST00000390858 107 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 RNU2-7P-201ENST00000410794 178 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 BX276092.1-201ENST00000427368 251 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 YWHAEP2-201ENST00000580066 112 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 YWHAEP3-201ENST00000582767 121 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 AC022513.1-201ENST00000624512 117 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 Z97988.1-201ENST00000637697 135 ntBASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CTC1Q2NKJ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 MIRLET7F1-201ENST00000362202 87 ntBASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 RNU6-895P-201ENST00000384125 103 ntBASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 Y_RNA.443-201ENST00000384135 111 ntBASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 SNORA11.4-201ENST00000408823 129 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms