Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC113410.1-201ENST00000505029 247 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 MIR4679-2-201ENST00000578358 77 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 MIR3192-201ENST00000584920 77 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 MIR6841-201ENST00000637129 72 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC12P31275 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC12P31275 Y_RNA.281-201ENST00000364774 94 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 Y_RNA.470-201ENST00000384307 117 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC12P31275 AC009474.2-201ENST00000451383 136 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 RPS23P4-201ENST00000487908 423 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 Z97988.1-201ENST00000637697 135 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 AL589743.1-201ENST00000551932 2712 ntBASIC1.92□□□□□ -2.1
HOXC12P31275 MIR302D-201ENST00000362275 68 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 Y_RNA.140-201ENST00000363474 103 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 Y_RNA.226-201ENST00000364337 114 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 Y_RNA.299-201ENST00000364973 94 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 Y_RNA.354-201ENST00000365448 111 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 Y_RNA.362-201ENST00000365518 110 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 MIR548D2-201ENST00000384955 97 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
HOXC12P31275 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 CYP3A52P-201ENST00000563326 91 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 AL035470.1-201ENST00000622571 220 ntBASIC1.91□□□□□ -2.1
HOXC12P31275 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HOXC12P31275 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 SNORD115-2-201ENST00000362842 82 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 Y_RNA.85-201ENST00000363014 111 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 RNA5SP48-201ENST00000363969 126 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 RNU6-1107P-201ENST00000364817 104 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 SNORD115-20-201ENST00000365099 82 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 MIR4498-201ENST00000577599 66 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 MIR3937-201ENST00000580135 106 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC12P31275 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC12P31275 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 MIR7111-201ENST00000619751 72 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
HOXC12P31275 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC12P31275 SNORA25.3-201ENST00000363205 127 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 RNU6-755P-201ENST00000364400 103 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 RNU6-153P-201ENST00000364422 104 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 Y_RNA.344-201ENST00000365381 112 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 SNORD38B-201ENST00000384690 67 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 RNU4-69P-201ENST00000410677 143 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 RNU6-602P-201ENST00000411155 105 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 AC090844.1-201ENST00000422019 156 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 AC245047.7-201ENST00000440265 293 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC12P31275 SNORD38B-202ENST00000625943 69 ntBASIC1.89□□□□□ -2.11
HOXC12P31275 RNU6-1065P-201ENST00000384513 106 ntBASIC1.88□□□□□ -2.11
HOXC12P31275 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
HOXC12P31275 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC12P31275 MIR548AE2-201ENST00000583456 67 ntBASIC1.88□□□□□ -2.11
HOXC12P31275 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
HOXC12P31275 AC087741.2-201ENST00000619415 172 ntBASIC1.88□□□□□ -2.11
HOXC12P31275 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
HOXC12P31275 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HOXC12P31275 Y_RNA.49-201ENST00000362714 112 ntBASIC1.87□□□□□ -2.11
HOXC12P31275 SNORA32-201ENST00000384072 121 ntBASIC1.87□□□□□ -2.11
HOXC12P31275 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
HOXC12P31275 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
HOXC12P31275 RNU6-1053P-201ENST00000515930 101 ntBASIC1.87□□□□□ -2.11
HOXC12P31275 RNU1-17P-201ENST00000363022 152 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 Y_RNA.116-201ENST00000363292 103 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 SNORD77B-201ENST00000391112 67 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 RPL39P34-201ENST00000477141 156 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 PRELID3BP2-201ENST00000605362 201 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
HOXC12P31275 AL161722.3-201ENST00000605789 2983 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 MIR1287-201ENST00000408492 90 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 AL133373.1-201ENST00000497098 94 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 AC068339.1-201ENST00000526965 141 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 uc_338.28-201ENST00000612082 187 ntBASIC1.85□□□□□ -2.11
HOXC12P31275 RNU6-1014P-201ENST00000383940 103 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 RNU6-342P-201ENST00000384521 104 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 RNU6-1237P-201ENST00000384777 107 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC12P31275 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 MIR3664-201ENST00000579074 99 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 Y_RNA.773-201ENST00000607168 90 ntBASIC1.84□□□□□ -2.11
HOXC12P31275 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HOXC12P31275 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC12P31275 U8.6-201ENST00000364939 135 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 Y_RNA.309-201ENST00000365046 111 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 RNU6-106P-201ENST00000384405 107 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 SNORA18-201ENST00000384416 132 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms