Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD44P16070 MIR490-201ENST00000384865 128 ntBASIC3.64□□□□□ -1.83
CD44P16070 MIR29C-201ENST00000385231 88 ntBASIC3.64□□□□□ -1.83
CD44P16070 RNU6ATAC-201ENST00000408749 126 ntBASIC3.64□□□□□ -1.83
CD44P16070 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.64□□□□□ -1.83
CD44P16070 AC097635.1-201ENST00000450678 155 ntBASIC3.64□□□□□ -1.83
CD44P16070 RNU7-62P-201ENST00000458856 62 ntBASIC3.64□□□□□ -1.83
CD44P16070 RNU7-24P-201ENST00000458867 62 ntBASIC3.64□□□□□ -1.83
CD44P16070 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
CD44P16070 AC013244.2-201ENST00000603396 103 ntBASIC3.64□□□□□ -1.83
CD44P16070 uc_338.6-201ENST00000613544 171 ntBASIC3.64□□□□□ -1.83
CD44P16070 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
CD44P16070 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CD44P16070 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD44P16070 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
CD44P16070 Y_RNA.56-201ENST00000362798 112 ntBASIC3.63□□□□□ -1.83
CD44P16070 AC115115.1-201ENST00000449927 248 ntBASIC3.63□□□□□ -1.83
CD44P16070 RNU6-1265P-201ENST00000516342 103 ntBASIC3.63□□□□□ -1.83
CD44P16070 RNA5SP309-201ENST00000516670 106 ntBASIC3.63□□□□□ -1.83
CD44P16070 RNU6-902P-201ENST00000517212 91 ntBASIC3.63□□□□□ -1.83
CD44P16070 AP000942.3-201ENST00000603702 160 ntBASIC3.63□□□□□ -1.83
CD44P16070 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.63□□□□□ -1.83
CD44P16070 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CD44P16070 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD44P16070 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD44P16070 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CD44P16070 MIR548F3-201ENST00000408509 87 ntBASIC3.62□□□□□ -1.83
CD44P16070 MIR1302-7-201ENST00000408841 72 ntBASIC3.62□□□□□ -1.83
CD44P16070 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.62□□□□□ -1.83
CD44P16070 Y_RNA.697-201ENST00000516776 113 ntBASIC3.62□□□□□ -1.83
CD44P16070 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.62□□□□□ -1.83
CD44P16070 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.62□□□□□ -1.83
CD44P16070 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CD44P16070 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CD44P16070 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD44P16070 RNU6-396P-201ENST00000365369 105 ntBASIC3.61□□□□□ -1.83
CD44P16070 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
CD44P16070 MIR203A-201ENST00000384836 110 ntBASIC3.61□□□□□ -1.83
CD44P16070 SNORD93-201ENST00000408813 74 ntBASIC3.61□□□□□ -1.83
CD44P16070 AL449363.1-201ENST00000617815 186 ntBASIC3.61□□□□□ -1.83
CD44P16070 MAPK10-362ENST00000641864 4484 ntBASIC3.61□□□□□ -1.83
CD44P16070 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CD44P16070 MAPK10-322ENST00000641485 4530 ntBASIC3.61□□□□□ -1.83
CD44P16070 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CD44P16070 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD44P16070 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.6□□□□□ -1.83
CD44P16070 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
CD44P16070 RNA5SP295-201ENST00000362655 121 ntBASIC3.6□□□□□ -1.83
CD44P16070 RNU6-403P-201ENST00000363163 104 ntBASIC3.6□□□□□ -1.83
CD44P16070 MIR597-201ENST00000384968 97 ntBASIC3.6□□□□□ -1.83
CD44P16070 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
CD44P16070 U3.45-201ENST00000607547 219 ntBASIC3.6□□□□□ -1.83
CD44P16070 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD44P16070 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD44P16070 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CD44P16070 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD44P16070 RNA5SP383-201ENST00000362934 120 ntBASIC3.59□□□□□ -1.83
CD44P16070 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.59□□□□□ -1.83
CD44P16070 RNA5SP481-201ENST00000516814 122 ntBASIC3.59□□□□□ -1.83
CD44P16070 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
CD44P16070 MIR4276-201ENST00000584832 70 ntBASIC3.59□□□□□ -1.83
CD44P16070 MIR7153-201ENST00000637758 57 ntBASIC3.59□□□□□ -1.83
CD44P16070 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD44P16070 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CD44P16070 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.84
CD44P16070 AC092435.3-201ENST00000565538 3654 ntBASIC3.59□□□□□ -1.84
CD44P16070 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CD44P16070 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CD44P16070 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD44P16070 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD44P16070 RPS29P4-201ENST00000414733 161 ntBASIC3.58□□□□□ -1.84
CD44P16070 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
CD44P16070 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
CD44P16070 RNU6-1089P-201ENST00000516473 104 ntBASIC3.58□□□□□ -1.84
CD44P16070 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
CD44P16070 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.58□□□□□ -1.84
CD44P16070 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
CD44P16070 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD44P16070 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD44P16070 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD44P16070 RNU6-495P-201ENST00000362995 107 ntBASIC3.57□□□□□ -1.84
CD44P16070 RNU1-36P-201ENST00000365130 165 ntBASIC3.57□□□□□ -1.84
CD44P16070 MIR554-201ENST00000384874 96 ntBASIC3.57□□□□□ -1.84
CD44P16070 MIR599-201ENST00000385069 95 ntBASIC3.57□□□□□ -1.84
CD44P16070 MIR134-201ENST00000385258 73 ntBASIC3.57□□□□□ -1.84
CD44P16070 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD44P16070 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.57□□□□□ -1.84
CD44P16070 RPL30P7-201ENST00000479312 323 ntBASIC3.57□□□□□ -1.84
CD44P16070 RNVU1-2-201ENST00000516326 135 ntBASIC3.57□□□□□ -1.84
CD44P16070 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.57□□□□□ -1.84
CD44P16070 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.57□□□□□ -1.84
CD44P16070 MIR548V-201ENST00000584165 80 ntBASIC3.57□□□□□ -1.84
CD44P16070 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.57□□□□□ -1.84
CD44P16070 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD44P16070 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD44P16070 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD44P16070 AC073325.2-201ENST00000339545 159 ntBASIC3.56□□□□□ -1.84
CD44P16070 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
CD44P16070 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
CD44P16070 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms