Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
DLX3O60479 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
DLX3O60479 AL035461.1-201ENST00000421490 332 ntBASIC1.87□□□□□ -2.11
DLX3O60479 AL512326.2-201ENST00000426359 151 ntBASIC1.87□□□□□ -2.11
DLX3O60479 RNU6-412P-201ENST00000516434 106 ntBASIC1.87□□□□□ -2.11
DLX3O60479 AC007012.1-201ENST00000567192 175 ntBASIC1.87□□□□□ -2.11
DLX3O60479 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
DLX3O60479 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
DLX3O60479 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
DLX3O60479 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
DLX3O60479 SNORD115-2-201ENST00000362842 82 ntBASIC1.86□□□□□ -2.11
DLX3O60479 SNORD115-20-201ENST00000365099 82 ntBASIC1.86□□□□□ -2.11
DLX3O60479 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
DLX3O60479 HMGN1P33-201ENST00000432945 451 ntBASIC1.86□□□□□ -2.11
DLX3O60479 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
DLX3O60479 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
DLX3O60479 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
DLX3O60479 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
DLX3O60479 AC113410.1-201ENST00000505029 247 ntBASIC1.86□□□□□ -2.11
DLX3O60479 MIR3192-201ENST00000584920 77 ntBASIC1.86□□□□□ -2.11
DLX3O60479 Y_RNA.171-201ENST00000363760 102 ntBASIC1.85□□□□□ -2.11
DLX3O60479 SNORD38B-201ENST00000384690 67 ntBASIC1.85□□□□□ -2.11
DLX3O60479 RNU6-1104P-201ENST00000384723 104 ntBASIC1.85□□□□□ -2.11
DLX3O60479 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
DLX3O60479 RPS23P4-201ENST00000487908 423 ntBASIC1.85□□□□□ -2.11
DLX3O60479 RNU6-589P-201ENST00000516485 107 ntBASIC1.85□□□□□ -2.11
DLX3O60479 Y_RNA.709-201ENST00000516952 92 ntBASIC1.85□□□□□ -2.11
DLX3O60479 MIR4679-2-201ENST00000578358 77 ntBASIC1.85□□□□□ -2.11
DLX3O60479 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
DLX3O60479 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
DLX3O60479 SNORD38B-202ENST00000625943 69 ntBASIC1.85□□□□□ -2.11
DLX3O60479 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
DLX3O60479 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
DLX3O60479 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.84□□□□□ -2.11
DLX3O60479 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
DLX3O60479 Y_RNA.35-201ENST00000362601 101 ntBASIC1.84□□□□□ -2.11
DLX3O60479 Y_RNA.81-201ENST00000362997 102 ntBASIC1.84□□□□□ -2.11
DLX3O60479 MTATP6P29-201ENST00000415057 132 ntBASIC1.84□□□□□ -2.11
DLX3O60479 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
DLX3O60479 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.84□□□□□ -2.11
DLX3O60479 RNA5SP33-201ENST00000516687 98 ntBASIC1.84□□□□□ -2.11
DLX3O60479 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
DLX3O60479 AC022523.2-201ENST00000561045 150 ntBASIC1.84□□□□□ -2.11
DLX3O60479 MIR3664-201ENST00000579074 99 ntBASIC1.84□□□□□ -2.11
DLX3O60479 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
DLX3O60479 RNU6-602P-201ENST00000411155 105 ntBASIC1.83□□□□□ -2.12
DLX3O60479 AC245047.7-201ENST00000440265 293 ntBASIC1.83□□□□□ -2.12
DLX3O60479 RNU6-1258P-201ENST00000516911 111 ntBASIC1.83□□□□□ -2.12
DLX3O60479 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.83□□□□□ -2.12
DLX3O60479 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
DLX3O60479 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
DLX3O60479 RNU4-69P-201ENST00000410677 143 ntBASIC1.82□□□□□ -2.12
DLX3O60479 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
DLX3O60479 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
DLX3O60479 RNU7-6P-201ENST00000516845 62 ntBASIC1.82□□□□□ -2.12
DLX3O60479 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
DLX3O60479 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
DLX3O60479 AL589743.1-201ENST00000551932 2712 ntBASIC1.81□□□□□ -2.12
DLX3O60479 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
DLX3O60479 Y_RNA.281-201ENST00000364774 94 ntBASIC1.81□□□□□ -2.12
DLX3O60479 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
DLX3O60479 MIR548D2-201ENST00000384955 97 ntBASIC1.81□□□□□ -2.12
DLX3O60479 MT-TI-201ENST00000387365 69 ntBASIC1.81□□□□□ -2.12
DLX3O60479 RNY4P18-201ENST00000391107 89 ntBASIC1.81□□□□□ -2.12
DLX3O60479 SNORD77B-201ENST00000391112 67 ntBASIC1.81□□□□□ -2.12
DLX3O60479 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
DLX3O60479 AL353997.5-201ENST00000618886 171 ntBASIC1.81□□□□□ -2.12
DLX3O60479 MIR8065-201ENST00000620577 100 ntBASIC1.81□□□□□ -2.12
DLX3O60479 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
DLX3O60479 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
DLX3O60479 RNU6-44P-201ENST00000384045 107 ntBASIC1.8□□□□□ -2.12
DLX3O60479 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
DLX3O60479 AC063976.4-201ENST00000421971 163 ntBASIC1.8□□□□□ -2.12
DLX3O60479 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
DLX3O60479 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
DLX3O60479 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
DLX3O60479 Y_RNA.470-201ENST00000384307 117 ntBASIC1.79□□□□□ -2.12
DLX3O60479 SNORD12C-201ENST00000386307 89 ntBASIC1.79□□□□□ -2.12
DLX3O60479 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.79□□□□□ -2.12
DLX3O60479 RNA5SP458-201ENST00000516188 119 ntBASIC1.79□□□□□ -2.12
DLX3O60479 RNU11-2P-201ENST00000516898 142 ntBASIC1.79□□□□□ -2.12
DLX3O60479 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
DLX3O60479 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
DLX3O60479 Y_RNA.49-201ENST00000362714 112 ntBASIC1.78□□□□□ -2.12
DLX3O60479 SNORA25.3-201ENST00000363205 127 ntBASIC1.78□□□□□ -2.12
DLX3O60479 Y_RNA.362-201ENST00000365518 110 ntBASIC1.78□□□□□ -2.12
DLX3O60479 SNORA22-201ENST00000383907 134 ntBASIC1.78□□□□□ -2.12
DLX3O60479 AC090844.1-201ENST00000422019 156 ntBASIC1.78□□□□□ -2.12
DLX3O60479 RPL39P34-201ENST00000477141 156 ntBASIC1.78□□□□□ -2.12
DLX3O60479 MIR2115-201ENST00000516657 100 ntBASIC1.78□□□□□ -2.12
DLX3O60479 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
DLX3O60479 MIR548AE2-201ENST00000583456 67 ntBASIC1.78□□□□□ -2.12
DLX3O60479 PRELID3BP2-201ENST00000605362 201 ntBASIC1.78□□□□□ -2.12
DLX3O60479 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
DLX3O60479 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.77□□□□□ -2.13
DLX3O60479 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
DLX3O60479 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
DLX3O60479 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
DLX3O60479 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
DLX3O60479 AP000753.3-201ENST00000604083 169 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms