Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC104027.1-201ENST00000521887 300 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 AC022149.2-201ENST00000621061 203 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 U6.109-201ENST00000636749 87 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHGA4Q9Y5G9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA4Q9Y5G9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 Y_RNA.36-201ENST00000362602 112 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR520C-201ENST00000385005 87 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU6-466P-201ENST00000391224 103 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 AC244636.1-201ENST00000421152 228 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 AC011753.1-201ENST00000451001 220 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 RN7SL499P-201ENST00000481141 276 ntBASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA4Q9Y5G9 Y_RNA.119-201ENST00000363301 96 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR516A2-201ENST00000384888 90 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR516A1-201ENST00000385033 90 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR3935-201ENST00000583472 104 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 AL449363.1-201ENST00000617815 186 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR4251-201ENST00000635819 61 ntBASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA4Q9Y5G9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU4-35P-201ENST00000362588 141 ntBASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR942-201ENST00000401111 86 ntBASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 AC099513.1-201ENST00000490423 301 ntBASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PCDHGA4Q9Y5G9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR424-201ENST00000362227 98 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR597-201ENST00000384968 97 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 RNA5SP437-201ENST00000517249 129 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR4513-201ENST00000581077 86 ntBASIC3.37□□□□□ -1.87
PCDHGA4Q9Y5G9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 MIRLET7F1-201ENST00000362202 87 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU6-205P-201ENST00000390858 107 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU11-3P-201ENST00000391111 133 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 RNU6-630P-201ENST00000391258 106 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 snoU13.27-201ENST00000459278 104 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 AC022202.1-201ENST00000613515 211 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR7112-201ENST00000616126 65 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 AL161431.1-201ENST00000618966 4205 ntBASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA4Q9Y5G9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR518E-201ENST00000385252 88 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 SNORD90-201ENST00000391145 111 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC245517.4-201ENST00000448601 281 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC026333.2-201ENST00000542164 106 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AC121758.2-201ENST00000553271 193 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 AL096861.1-201ENST00000610899 123 ntBASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA4Q9Y5G9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 snoU13.2-201ENST00000459201 104 ntBASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 RNA5SP481-201ENST00000516814 122 ntBASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 MIR6852-201ENST00000621699 66 ntBASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA4Q9Y5G9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-330P-201ENST00000363015 107 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-154P-201ENST00000384306 106 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 RPL23AP94-201ENST00000512518 302 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-56P-201ENST00000516986 93 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
PCDHGA4Q9Y5G9 SNORA25.4-201ENST00000363666 124 ntBASIC3.32□□□□□ -1.88
PCDHGA4Q9Y5G9 RNVU1-2-201ENST00000516326 135 ntBASIC3.32□□□□□ -1.88
PCDHGA4Q9Y5G9 SUB1P4-201ENST00000566062 339 ntBASIC3.32□□□□□ -1.88
PCDHGA4Q9Y5G9 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
PCDHGA4Q9Y5G9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-895P-201ENST00000384125 103 ntBASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 MIR1289-1-201ENST00000408836 144 ntBASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 snoU13.17-201ENST00000458802 104 ntBASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
PCDHGA4Q9Y5G9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 Y_RNA.42-201ENST00000362660 108 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-291P-201ENST00000384720 107 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 AC244023.1-201ENST00000426884 112 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms