Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LHX6Q9UPM6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LHX6Q9UPM6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LHX6Q9UPM6 Y_RNA.371-201ENST00000365591 113 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 SNORA44-201ENST00000384584 132 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 AL096861.1-201ENST00000610899 123 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 MIR4251-201ENST00000635819 61 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 AP000553.6-201ENST00000641242 118 ntBASIC3.34□□□□□ -1.87
LHX6Q9UPM6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LHX6Q9UPM6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 RNU6-1051P-201ENST00000365471 102 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 SNORD45A-201ENST00000384512 84 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MIR633-201ENST00000384821 98 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MIR520A-201ENST00000384862 85 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 RNU1-101P-201ENST00000391171 127 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 snoU13.2-201ENST00000459201 104 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MIR4709-201ENST00000577272 72 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MIR3162-201ENST00000581818 82 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
LHX6Q9UPM6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LHX6Q9UPM6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 RNU6-957P-201ENST00000363652 99 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 Y_RNA.207-201ENST00000364142 106 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 RNY4P3-201ENST00000365254 95 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 BX510359.4-201ENST00000423750 193 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 AC099513.1-201ENST00000490423 301 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 RNU6-881P-201ENST00000516813 102 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 AC008011.1-201ENST00000545989 227 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
LHX6Q9UPM6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX6Q9UPM6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LHX6Q9UPM6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LHX6Q9UPM6 MIR424-201ENST00000362227 98 ntBASIC3.31□□□□□ -1.88
LHX6Q9UPM6 RNU2-7P-201ENST00000410794 178 ntBASIC3.31□□□□□ -1.88
LHX6Q9UPM6 ARF4P2-201ENST00000430209 526 ntBASIC3.31□□□□□ -1.88
LHX6Q9UPM6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX6Q9UPM6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 Y_RNA.606-201ENST00000410579 103 ntBASIC3.3□□□□□ -1.88
LHX6Q9UPM6 RNU7-106P-201ENST00000459514 67 ntBASIC3.3□□□□□ -1.88
LHX6Q9UPM6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 U6.98-201ENST00000637157 84 ntBASIC3.3□□□□□ -1.88
LHX6Q9UPM6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX6Q9UPM6 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
LHX6Q9UPM6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LHX6Q9UPM6 MIR337-201ENST00000362281 93 ntBASIC3.29□□□□□ -1.88
LHX6Q9UPM6 MIR887-201ENST00000401258 79 ntBASIC3.29□□□□□ -1.88
LHX6Q9UPM6 RNA5SP508-201ENST00000411327 119 ntBASIC3.29□□□□□ -1.88
LHX6Q9UPM6 RNA5SP356-201ENST00000515972 94 ntBASIC3.29□□□□□ -1.88
LHX6Q9UPM6 SNORA4-201ENST00000584302 138 ntBASIC3.29□□□□□ -1.88
LHX6Q9UPM6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.29□□□□□ -1.88
LHX6Q9UPM6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LHX6Q9UPM6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LHX6Q9UPM6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LHX6Q9UPM6 RNU6-1216P-201ENST00000362590 107 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 MIR563-201ENST00000385080 79 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 RNA5SP247-201ENST00000411181 105 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 AC244023.1-201ENST00000426884 112 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 AC104332.2-201ENST00000429959 156 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 snoU13.27-201ENST00000459278 104 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 RNA5SP437-201ENST00000517249 129 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 AC242498.1-201ENST00000604134 111 ntBASIC3.28□□□□□ -1.88
LHX6Q9UPM6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX6Q9UPM6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX6Q9UPM6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX6Q9UPM6 SNORD115-22-201ENST00000364456 82 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 SNORD116-24-201ENST00000384549 92 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 RN7SL330P-201ENST00000469709 307 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 RNA5SP445-201ENST00000515889 115 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 RNU6-977P-201ENST00000516411 103 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 U4.6-201ENST00000621618 127 ntBASIC3.27□□□□□ -1.89
LHX6Q9UPM6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX6Q9UPM6 AL021368.2-201ENST00000606125 5352 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LHX6Q9UPM6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
LHX6Q9UPM6 SNORD45.1-201ENST00000363181 77 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 MIR588-201ENST00000384900 83 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms