Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-397P-201ENST00000516226 104 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIR2115-201ENST00000516657 100 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.713-201ENST00000517013 96 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-897P-201ENST00000517135 105 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 UBE2V2P2-201ENST00000587677 504 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AP001282.2-201ENST00000616149 309 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.136-201ENST00000363444 102 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 SNORD113-8-201ENST00000363497 74 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.185-201ENST00000363894 100 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.303-201ENST00000364998 94 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 SNORA63.7-201ENST00000365579 123 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 SNORA22B-201ENST00000383876 138 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 RNU6-949P-201ENST00000384040 107 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 SNORD61-201ENST00000384252 73 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 MIR563-201ENST00000385080 79 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 RNU2-59P-201ENST00000410482 191 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.03□□□□□ -2.4
CCDC88CQ9P219 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.03□□□□□ -2.4
CCDC88CQ9P219 FGF7P4-201ENST00000509595 295 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.03□□□□□ -2.4
CCDC88CQ9P219 SNORA36.1-201ENST00000363424 132 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.241-201ENST00000364470 117 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU1-115P-201ENST00000365329 160 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 MT-TF-201ENST00000387314 71 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-823P-201ENST00000391042 103 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 ELOCP20-201ENST00000422460 345 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 AC024067.1-201ENST00000426199 223 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.03□□□□□ -2.41
CCDC88CQ9P219 SERF1AP1-201ENST00000514575 187 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 MTCO2P24-201ENST00000515611 426 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU6-1338P-201ENST00000516328 91 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 RNU4-77P-201ENST00000516692 156 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 AL442067.1-201ENST00000613261 223 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.41
CCDC88CQ9P219 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.03□□□□□ -2.41
CCDC88CQ9P219 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNU6-728P-201ENST00000365375 104 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.536-201ENST00000384621 113 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.549-201ENST00000384657 102 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNU6-913P-201ENST00000390913 95 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.579-201ENST00000390939 94 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNA5SP496-201ENST00000391240 109 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNA5SP94-201ENST00000516917 108 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNU6-570P-201ENST00000517051 105 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 RNU6-1137P-201ENST00000517073 99 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 AC133485.4-201ENST00000561835 220 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 snoU18.1-201ENST00000629629 71 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.02□□□□□ -2.41
CCDC88CQ9P219 UBE2WP1-201ENST00000362030 340 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.16-201ENST00000362421 102 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-1138P-201ENST00000365359 106 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-1189P-201ENST00000383958 107 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 SNORA8.2-201ENST00000384372 139 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 SNORA51.10-201ENST00000384418 136 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-21P-201ENST00000384710 107 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.581-201ENST00000391017 97 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 SNORD77.3-201ENST00000391113 65 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 MIR938-201ENST00000401216 83 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 AC087499.4-201ENST00000448505 178 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 SNORA27.4-201ENST00000516650 95 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU7-4P-201ENST00000516961 62 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 AL133255.1-201ENST00000606374 441 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 AC090574.1-201ENST00000623186 233 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 AC010332.2-201ENST00000613083 1904 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 MIR302B-201ENST00000362188 73 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU4-50P-201ENST00000364361 141 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-923P-201ENST00000364753 107 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.286-201ENST00000364813 102 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNA5SP117-201ENST00000365294 118 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.505-201ENST00000384489 102 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.572-201ENST00000384757 98 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 BX276092.1-201ENST00000427368 251 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 RNU6-1258P-201ENST00000516911 111 ntBASIC0.01□□□□□ -2.41
CCDC88CQ9P219 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.01□□□□□ -2.41
CCDC88CQ9P219 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.01□□□□□ -2.41
CCDC88CQ9P219 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0□□□□□ -2.41
CCDC88CQ9P219 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.23-201ENST00000362496 106 ntBASIC0□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.64-201ENST00000362845 102 ntBASIC0□□□□□ -2.41
CCDC88CQ9P219 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
CCDC88CQ9P219 SNORA8.3-201ENST00000384679 139 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 254.4 ms