Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MTND5P40-201ENST00000559945 246 ntBASIC3□□□□□ -1.93
CNTNAP3Q9BZ76 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CNTNAP3Q9BZ76 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-862P-201ENST00000362804 105 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-23P-201ENST00000363283 107 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-499P-201ENST00000365615 107 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 AC245047.7-201ENST00000440265 293 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 STAG3L5P-204ENST00000443759 179 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RN7SL594P-201ENST00000470590 287 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-807P-201ENST00000516805 107 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-579P-201ENST00000516879 102 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 MIR4484-201ENST00000582855 83 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 AC105081.1-201ENST00000617727 106 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 AC022149.2-201ENST00000621061 203 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 MIR1297-201ENST00000637311 77 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 AC245060.5-201ENST00000610778 3293 ntBASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CNTNAP3Q9BZ76 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 Y_RNA.98-201ENST00000363109 102 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 RNA5SP493-201ENST00000364115 91 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 AC006483.1-201ENST00000487308 313 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 RNU7-79P-201ENST00000516082 62 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 MIR8054-201ENST00000620877 86 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 MIR664A-201ENST00000626086 82 ntBASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTNAP3Q9BZ76 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 HSBP1P2-201ENST00000299671 229 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 RNU6-833P-201ENST00000363486 107 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 SNORA25.9-201ENST00000365087 128 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 MIR635-201ENST00000384830 98 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 MIR29C-201ENST00000385231 88 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 RNA5SP109-201ENST00000391010 116 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 SNORD109B-201ENST00000458961 67 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 SNORD109A-201ENST00000459128 67 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 AL512598.1-201ENST00000610158 273 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 MIR8055-201ENST00000610739 97 ntBASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CNTNAP3Q9BZ76 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 RNA5SP383-201ENST00000362934 120 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6-1086P-201ENST00000410930 100 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6-602P-201ENST00000411155 105 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 AC074348.1-201ENST00000426503 132 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 HMGN1P33-201ENST00000432945 451 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 MIR3169-201ENST00000578032 83 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 SNORA28-201ENST00000606769 126 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 MIR8065-201ENST00000620577 100 ntBASIC2.96□□□□□ -1.94
CNTNAP3Q9BZ76 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 MIR2276-201ENST00000516886 89 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 AC026333.2-201ENST00000542164 106 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 AC005786.1-201ENST00000588553 154 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 MIR8066-201ENST00000617280 78 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 AC243994.1-201ENST00000618627 109 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 AP001362.1-201ENST00000625165 124 ntBASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CNTNAP3Q9BZ76 Y_RNA.596-201ENST00000410462 109 ntBASIC2.94□□□□□ -1.94
CNTNAP3Q9BZ76 HMGN1P18-201ENST00000457642 277 ntBASIC2.94□□□□□ -1.94
CNTNAP3Q9BZ76 SNORA64.4-201ENST00000516632 81 ntBASIC2.94□□□□□ -1.94
CNTNAP3Q9BZ76 AC069114.2-201ENST00000604699 304 ntBASIC2.94□□□□□ -1.94
CNTNAP3Q9BZ76 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CNTNAP3Q9BZ76 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 MIR9-2-201ENST00000384838 87 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 U8.16-201ENST00000391279 133 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 AC087499.2-201ENST00000432861 149 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 SNORA31.10-201ENST00000516482 106 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 SNORA70.19-201ENST00000516717 90 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 MIR548AR-201ENST00000582191 57 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CNTNAP3Q9BZ76 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 SNORD115-31-201ENST00000365318 82 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 MIR516B2-201ENST00000385190 85 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 RNA5SP292-201ENST00000390974 118 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 SNORD28B-201ENST00000390993 75 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 RNU4-83P-201ENST00000410863 133 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 Y_RNA.648-201ENST00000459455 110 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 MIR4781-201ENST00000585250 76 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.92□□□□□ -1.94
CNTNAP3Q9BZ76 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6-1241P-201ENST00000384536 107 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 SNORD77.2-201ENST00000391045 68 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6-663P-201ENST00000391105 106 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 HMGN2P3-201ENST00000433603 273 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms