Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU6-974P-201ENST00000384099 108 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1024P-201ENST00000384199 107 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-246P-201ENST00000384702 107 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR521-2-201ENST00000384818 87 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA48.8-201ENST00000391324 134 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNA5SP237-201ENST00000410414 113 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 HMGN2P35-201ENST00000412164 270 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 EEF1A1P41-201ENST00000414667 207 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 HMGN2P38-201ENST00000423806 265 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AL590383.1-201ENST00000428602 75 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AC093850.1-201ENST00000454121 251 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 GTF3AP2-201ENST00000557014 266 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR3162-201ENST00000581818 82 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AC008608.1-201ENST00000603910 127 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA28-201ENST00000606769 126 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AL662814.1-201ENST00000617364 121 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR22-201ENST00000362190 85 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNA5SP432-201ENST00000362480 116 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA5B-201ENST00000363786 132 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-884P-201ENST00000363889 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNA5SP48-201ENST00000363969 126 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-461P-201ENST00000364195 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA71.1-201ENST00000364523 117 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-217P-201ENST00000384164 104 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU1-57P-201ENST00000384491 166 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORD15B-201ENST00000384714 146 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNA5SP482-201ENST00000391269 118 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR1289-1-201ENST00000408836 144 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU4-47P-201ENST00000410876 114 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 AC022018.1-201ENST00000430685 241 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 snoU13.16-201ENST00000459350 104 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 S100A11P1-201ENST00000477525 312 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 TRAJ51-201ENST00000504127 63 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR4513-201ENST00000581077 86 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 SCARNA15.3-201ENST00000626315 122 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 SCARNA4.1-201ENST00000628597 123 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 CTSLP2-204ENST00000629029 392 ntBASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-3Q9BYR4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-3Q9BYR4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-3Q9BYR4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.03□□□□□ -2.25
KRTAP4-3Q9BYR4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-3Q9BYR4 CEP170P1-201ENST00000502249 4587 ntBASIC1.03□□□□□ -2.25
KRTAP4-3Q9BYR4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 AC080100.1-201ENST00000624239 5356 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR449A-201ENST00000362113 91 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-1128P-201ENST00000362825 109 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.74-201ENST00000362911 99 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD45.2-201ENST00000363552 72 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.250-201ENST00000364542 110 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-1279P-201ENST00000383917 103 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR125B1-201ENST00000385236 88 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR527-201ENST00000385244 85 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 U8.13-201ENST00000390842 128 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD28B-201ENST00000390993 75 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 Z98941.1-201ENST00000407764 100 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR1250-201ENST00000408098 113 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 AC244505.4-201ENST00000434905 287 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 SSXP5-201ENST00000443473 287 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 HMGN1P18-201ENST00000457642 277 ntBASIC1.02□□□□□ -2.25
KRTAP4-3Q9BYR4 snoU13.2-201ENST00000459201 104 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms