Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORD38B-201ENST00000384690 67 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 Y_RNA.611-201ENST00000410682 108 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 AC011753.1-201ENST00000451001 220 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 SNORD38B-202ENST00000625943 69 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHOX2BQ99453 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHOX2BQ99453 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
PHOX2BQ99453 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
PHOX2BQ99453 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
PHOX2BQ99453 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHOX2BQ99453 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHOX2BQ99453 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHOX2BQ99453 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHOX2BQ99453 RNU6-1125P-201ENST00000363601 107 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 RNU6-480P-201ENST00000384332 107 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 MIR34C-201ENST00000384831 77 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 Y_RNA.607-201ENST00000410597 98 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 SNORD67.1-201ENST00000516618 108 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
PHOX2BQ99453 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PHOX2BQ99453 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHOX2BQ99453 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
PHOX2BQ99453 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHOX2BQ99453 AC131280.1-202ENST00000624067 4211 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 SNORA3.2-201ENST00000408221 125 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 AL161932.1-201ENST00000437408 146 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 RNU7-48P-201ENST00000458875 63 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 RNA5SP445-201ENST00000515889 115 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 RNU6-857P-201ENST00000515893 110 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 RNU7-137P-201ENST00000516788 62 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 AC006160.2-201ENST00000637708 154 ntBASIC3.11□□□□□ -1.91
PHOX2BQ99453 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PHOX2BQ99453 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PHOX2BQ99453 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHOX2BQ99453 SPINT5P-201ENST00000448174 155 ntBASIC3.1□□□□□ -1.91
PHOX2BQ99453 SNORD109B-201ENST00000458961 67 ntBASIC3.1□□□□□ -1.91
PHOX2BQ99453 SNORD109A-201ENST00000459128 67 ntBASIC3.1□□□□□ -1.91
PHOX2BQ99453 MIR3935-201ENST00000583472 104 ntBASIC3.1□□□□□ -1.91
PHOX2BQ99453 MIR548BB-201ENST00000626714 66 ntBASIC3.1□□□□□ -1.91
PHOX2BQ99453 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PHOX2BQ99453 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHOX2BQ99453 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHOX2BQ99453 Y_RNA.609-201ENST00000410669 89 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.09□□□□□ -1.91
PHOX2BQ99453 MTND5P40-201ENST00000559945 246 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 AP001362.1-201ENST00000625165 124 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 MIR4251-201ENST00000635819 61 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 MIR4662A-201ENST00000637499 67 ntBASIC3.09□□□□□ -1.91
PHOX2BQ99453 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
PHOX2BQ99453 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PHOX2BQ99453 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PHOX2BQ99453 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
PHOX2BQ99453 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PHOX2BQ99453 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.08□□□□□ -1.92
PHOX2BQ99453 RNU6-1321P-201ENST00000390905 107 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 RNA5SP100-201ENST00000410903 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 RNA5SP59-201ENST00000410922 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 MIR4529-201ENST00000578110 78 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.08□□□□□ -1.92
PHOX2BQ99453 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHOX2BQ99453 ZNF658B-202ENST00000615961 3375 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 Y_RNA.313-201ENST00000365095 103 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 SNORD67-201ENST00000390833 111 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 RNA5SP237-201ENST00000410414 113 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.07□□□□□ -1.92
PHOX2BQ99453 MIR4658-201ENST00000584344 65 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 AC046143.2-201ENST00000609789 160 ntBASIC3.07□□□□□ -1.92
PHOX2BQ99453 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PHOX2BQ99453 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PHOX2BQ99453 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PHOX2BQ99453 Y_RNA.173-201ENST00000363776 113 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 RNA5SP138-201ENST00000365098 114 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 MIR653-201ENST00000385279 96 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 RNU6-1307P-201ENST00000391012 103 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 MIR1287-201ENST00000408492 90 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.06□□□□□ -1.92
PHOX2BQ99453 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PHOX2BQ99453 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 Y_RNA.338-201ENST00000365320 114 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 SNORA67.4-201ENST00000384688 142 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 RPL31P63-201ENST00000422565 375 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 RNA5SP458-201ENST00000516188 119 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 RNU6-917P-201ENST00000516294 104 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.05□□□□□ -1.92
PHOX2BQ99453 AC133485.1-201ENST00000567176 124 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 AC012676.2-201ENST00000619258 186 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
PHOX2BQ99453 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
PHOX2BQ99453 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms