Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNIP1Q8TAD8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 SNORA18.5-201ENST00000516616 101 ntBASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 AC090897.1-201ENST00000580909 226 ntBASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 SNORA50A-202ENST00000629536 136 ntBASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 U6.111-201ENST00000636093 83 ntBASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SNIP1Q8TAD8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 SNORA64.4-201ENST00000516632 81 ntBASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 MIR4435-1-201ENST00000582552 80 ntBASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 UBL5P2-201ENST00000583788 219 ntBASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.01□□□□□ -1.93
SNIP1Q8TAD8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
SNIP1Q8TAD8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SNIP1Q8TAD8 SNORA38-201ENST00000363946 132 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 RNY1P2-201ENST00000364820 117 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 MIR520H-201ENST00000385126 88 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 SNORD77.2-201ENST00000391045 68 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 Y_RNA.596-201ENST00000410462 109 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 SNRPGP12-201ENST00000449481 213 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 RPS29P12-201ENST00000460178 152 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 CYP3A52P-201ENST00000563326 91 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 Z82195.2-201ENST00000612348 18351 ntBASIC3□□□□□ -1.93
SNIP1Q8TAD8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3□□□□□ -1.93
SNIP1Q8TAD8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 RNU1-70P-201ENST00000362618 164 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 RNU6-471P-201ENST00000383944 106 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 SNORA54-201ENST00000384281 123 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 AL139132.1-201ENST00000431587 344 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 HMGN1P18-201ENST00000457642 277 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 RNU6-850P-201ENST00000516934 103 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 AC141846.1-201ENST00000568348 142 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 MIR4500-201ENST00000579472 76 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 MIR4536-1-201ENST00000583537 88 ntBASIC2.99□□□□□ -1.93
SNIP1Q8TAD8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 RNU4-82P-201ENST00000362443 140 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 Y_RNA.264-201ENST00000364665 102 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 RNU6-296P-201ENST00000384608 107 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 RNA5SP184-201ENST00000411071 108 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 AC027119.1-201ENST00000440877 241 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 AC005908.1-201ENST00000468701 347 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 AC023790.1-201ENST00000482174 347 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 RPS27P21-201ENST00000486977 252 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 SNORA74.3-201ENST00000517108 154 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 uc_338.1-201ENST00000612113 180 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 AC022149.2-201ENST00000621061 203 ntBASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SNIP1Q8TAD8 AL161722.3-201ENST00000605789 2983 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 RNU1-58P-201ENST00000362413 163 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 SNORA72.6-201ENST00000384520 129 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 MIR1261-201ENST00000408659 82 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 AC074348.1-201ENST00000426503 132 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 AC105272.1-201ENST00000438604 198 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 RNU6-303P-201ENST00000517091 106 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 AC073476.4-201ENST00000628409 72 ntBASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
SNIP1Q8TAD8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 MIR30E-201ENST00000362104 92 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 RNU6-208P-201ENST00000362431 107 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 RNA5SP237-201ENST00000410414 113 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 HSPE1P24-201ENST00000450782 238 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 MIR4319-201ENST00000577285 85 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 AC067747.1-201ENST00000608026 250 ntBASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNIP1Q8TAD8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNIP1Q8TAD8 RNU6-132P-201ENST00000383863 107 ntBASIC2.95□□□□□ -1.94
SNIP1Q8TAD8 RNU6-1241P-201ENST00000384536 107 ntBASIC2.95□□□□□ -1.94
SNIP1Q8TAD8 SNORD15B-201ENST00000384714 146 ntBASIC2.95□□□□□ -1.94
SNIP1Q8TAD8 MIR660-201ENST00000385235 97 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms