Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 HMGN2P39-201ENST00000398005 273 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 AC099513.1-201ENST00000490423 301 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 MIR3935-201ENST00000583472 104 ntBASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LAPTM4BQ86VI4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 RNVU1-2-201ENST00000516326 135 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 MIR3200-201ENST00000580767 85 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 MIR4276-201ENST00000584832 70 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 MIR7112-201ENST00000616126 65 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LAPTM4BQ86VI4 WWP1P1-201ENST00000466609 2769 ntBASIC3.15□□□□□ -1.9
LAPTM4BQ86VI4 MIR491-201ENST00000384877 84 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 RNU6-630P-201ENST00000391258 106 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 RNU6-141P-201ENST00000410499 105 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 AC011753.1-201ENST00000451001 220 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 snoU13.27-201ENST00000459278 104 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 U6.98-201ENST00000637157 84 ntBASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.91
LAPTM4BQ86VI4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 AC245517.4-201ENST00000448601 281 ntBASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 snoU13.17-201ENST00000458802 104 ntBASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 SNORA59A-201ENST00000459326 152 ntBASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 AL096861.1-201ENST00000610899 123 ntBASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LAPTM4BQ86VI4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 MIR424-201ENST00000362227 98 ntBASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 Y_RNA.36-201ENST00000362602 112 ntBASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 Y_RNA.371-201ENST00000365591 113 ntBASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 AC104332.2-201ENST00000429959 156 ntBASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LAPTM4BQ86VI4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 RNU6-895P-201ENST00000384125 103 ntBASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 RNU6-154P-201ENST00000384306 106 ntBASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 MIR3126-201ENST00000577443 74 ntBASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4BQ86VI4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 AP006437.1-201ENST00000641440 3685 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 RNU6-957P-201ENST00000363652 99 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 MIR588-201ENST00000384900 83 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 MIR518E-201ENST00000385252 88 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 snoU13.2-201ENST00000459201 104 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 RNU7-41P-201ENST00000515917 61 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 MIR5680-201ENST00000577577 84 ntBASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LAPTM4BQ86VI4 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 MIR942-201ENST00000401111 86 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 AC244023.1-201ENST00000426884 112 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 HMGN2P3-201ENST00000433603 273 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 HMGN2P5-201ENST00000436882 273 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 RNU7-106P-201ENST00000459514 67 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 AC242498.1-201ENST00000604134 111 ntBASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.1□□□□□ -1.91
LAPTM4BQ86VI4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 ZNF209P-201ENST00000593450 2304 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 MIR337-201ENST00000362281 93 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 AC244636.1-201ENST00000421152 228 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 AC009474.2-201ENST00000451383 136 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 SNORA74D-201ENST00000516404 141 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
LAPTM4BQ86VI4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LAPTM4BQ86VI4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 AC092628.1-201ENST00000436250 252 ntBASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 RNA5SP481-201ENST00000516814 122 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms