Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 RNU6-1241P-201ENST00000384536 107 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 RNA5SP292-201ENST00000390974 118 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 RNU4-83P-201ENST00000410863 133 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 AC003685.2-201ENST00000422795 395 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 RPL23AP6-201ENST00000446637 472 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 NDUFB9P3-201ENST00000521269 501 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 AL357312.1-201ENST00000603879 298 ntBASIC2.8□□□□□ -1.96
RNFT1Q5M7Z0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 RNU6-208P-201ENST00000362431 107 ntBASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 MIR154-201ENST00000385243 84 ntBASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 AC005786.1-201ENST00000588553 154 ntBASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.79□□□□□ -1.96
RNFT1Q5M7Z0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 MIR22-201ENST00000362190 85 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 SNORA72.6-201ENST00000384520 129 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 RNU6-205P-201ENST00000390858 107 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 AC244636.1-201ENST00000421152 228 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 AC092427.1-202ENST00000430569 476 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 RN7SKP132-201ENST00000516001 208 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 RNU7-156P-201ENST00000517214 74 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 AC005520.4-201ENST00000604337 90 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNFT1Q5M7Z0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 SNORD115-31-201ENST00000365318 82 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-571P-201ENST00000384128 107 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-850P-201ENST00000516934 103 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 CYP3A52P-201ENST00000563326 91 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 AC090897.1-201ENST00000580909 226 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 MIR4536-1-201ENST00000583537 88 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 AC104996.3-201ENST00000590718 94 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 AC067747.1-201ENST00000608026 250 ntBASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RNFT1Q5M7Z0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 WWP1P1-201ENST00000466609 2769 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-461P-201ENST00000364195 107 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 AC015818.7-201ENST00000428754 109 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 AC023790.1-201ENST00000482174 347 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 MIR3064-201ENST00000581130 66 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 MIR7106-201ENST00000612419 65 ntBASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNFT1Q5M7Z0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 MIR526A1-201ENST00000384897 85 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 MIR548U-201ENST00000390728 81 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 HSPE1P24-201ENST00000450782 238 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 UBE2DNL-203ENST00000474922 222 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 RPL23AP94-201ENST00000512518 302 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 AC141846.1-201ENST00000568348 142 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
RNFT1Q5M7Z0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 Y_RNA.491-201ENST00000384417 107 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 MIR9-2-201ENST00000384838 87 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 HMGN1P18-201ENST00000457642 277 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 AC005908.1-201ENST00000468701 347 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 RNU1-143P-201ENST00000516296 146 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 YWHAEP2-201ENST00000580066 112 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 YWHAEP3-201ENST00000582767 121 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 U1.23-201ENST00000610293 146 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 RNU1-68P-201ENST00000615382 146 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 U1.39-201ENST00000621562 146 ntBASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNFT1Q5M7Z0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 Y_RNA.12-201ENST00000362393 112 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 SNORA8.1-201ENST00000384250 140 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 MIR942-201ENST00000401111 86 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 RPS27P21-201ENST00000486977 252 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 SNORA74.3-201ENST00000517108 154 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 MIR4506-201ENST00000584693 77 ntBASIC2.73□□□□□ -1.97
RNFT1Q5M7Z0 SNORD92-201ENST00000585078 85 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms