Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATN1P54259 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATN1P54259 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATN1P54259 RNU6-369P-201ENST00000362515 102 ntBASIC3.79□□□□□ -1.8
ATN1P54259 SNORA25.5-201ENST00000363782 126 ntBASIC3.79□□□□□ -1.8
ATN1P54259 SNORA67.4-201ENST00000384688 142 ntBASIC3.79□□□□□ -1.8
ATN1P54259 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.79□□□□□ -1.8
ATN1P54259 AC023141.11-201ENST00000508864 202 ntBASIC3.79□□□□□ -1.8
ATN1P54259 RNU6-542P-201ENST00000516405 103 ntBASIC3.79□□□□□ -1.8
ATN1P54259 MIR548AO-201ENST00000579992 96 ntBASIC3.79□□□□□ -1.8
ATN1P54259 AC005786.1-201ENST00000588553 154 ntBASIC3.79□□□□□ -1.8
ATN1P54259 RNU6-1335P-201ENST00000365426 107 ntBASIC3.78□□□□□ -1.8
ATN1P54259 SNORA24B-201ENST00000384176 131 ntBASIC3.78□□□□□ -1.8
ATN1P54259 RNU2-19P-201ENST00000517288 84 ntBASIC3.78□□□□□ -1.8
ATN1P54259 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.78□□□□□ -1.8
ATN1P54259 U4.3-201ENST00000621047 82 ntBASIC3.78□□□□□ -1.8
ATN1P54259 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATN1P54259 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
ATN1P54259 RNU6-1194P-201ENST00000516208 104 ntBASIC3.77□□□□□ -1.81
ATN1P54259 MIR4672-201ENST00000583126 81 ntBASIC3.77□□□□□ -1.81
ATN1P54259 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
ATN1P54259 AL513423.1-201ENST00000621695 132 ntBASIC3.77□□□□□ -1.81
ATN1P54259 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATN1P54259 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
ATN1P54259 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
ATN1P54259 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATN1P54259 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATN1P54259 MIR5089-201ENST00000580047 84 ntBASIC3.76□□□□□ -1.81
ATN1P54259 MIR3140-201ENST00000583685 90 ntBASIC3.76□□□□□ -1.81
ATN1P54259 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATN1P54259 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATN1P54259 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATN1P54259 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
ATN1P54259 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.75□□□□□ -1.81
ATN1P54259 MIR449A-201ENST00000362113 91 ntBASIC3.75□□□□□ -1.81
ATN1P54259 RNU6-824P-201ENST00000363724 104 ntBASIC3.75□□□□□ -1.81
ATN1P54259 SNORA16B-201ENST00000364674 135 ntBASIC3.75□□□□□ -1.81
ATN1P54259 SNORD63B-201ENST00000411005 70 ntBASIC3.75□□□□□ -1.81
ATN1P54259 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.75□□□□□ -1.81
ATN1P54259 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATN1P54259 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATN1P54259 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATN1P54259 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.74□□□□□ -1.81
ATN1P54259 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.74□□□□□ -1.81
ATN1P54259 RNA5SP192-201ENST00000364404 120 ntBASIC3.74□□□□□ -1.81
ATN1P54259 RNU4-47P-201ENST00000410876 114 ntBASIC3.74□□□□□ -1.81
ATN1P54259 snoU13.2-201ENST00000459201 104 ntBASIC3.74□□□□□ -1.81
ATN1P54259 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.74□□□□□ -1.81
ATN1P54259 MIR7153-201ENST00000637758 57 ntBASIC3.74□□□□□ -1.81
ATN1P54259 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
ATN1P54259 RN7SL93P-201ENST00000463035 293 ntBASIC3.73□□□□□ -1.81
ATN1P54259 RNU6-752P-201ENST00000516376 102 ntBASIC3.73□□□□□ -1.81
ATN1P54259 RNU6-579P-201ENST00000516879 102 ntBASIC3.73□□□□□ -1.81
ATN1P54259 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.73□□□□□ -1.81
ATN1P54259 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.73□□□□□ -1.81
ATN1P54259 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATN1P54259 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
ATN1P54259 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATN1P54259 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
ATN1P54259 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.72□□□□□ -1.81
ATN1P54259 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATN1P54259 SNORD113-4-201ENST00000364802 75 ntBASIC3.72□□□□□ -1.81
ATN1P54259 RNU4-88P-201ENST00000411220 86 ntBASIC3.72□□□□□ -1.81
ATN1P54259 RN7SL594P-201ENST00000470590 287 ntBASIC3.72□□□□□ -1.81
ATN1P54259 MIR3935-201ENST00000583472 104 ntBASIC3.72□□□□□ -1.81
ATN1P54259 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.72□□□□□ -1.81
ATN1P54259 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATN1P54259 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATN1P54259 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.72□□□□□ -1.81
ATN1P54259 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATN1P54259 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ATN1P54259 SNORA68.1-201ENST00000364537 132 ntBASIC3.71□□□□□ -1.82
ATN1P54259 Y_RNA.375-201ENST00000365625 101 ntBASIC3.71□□□□□ -1.82
ATN1P54259 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.71□□□□□ -1.82
ATN1P54259 AC003685.2-201ENST00000422795 395 ntBASIC3.71□□□□□ -1.82
ATN1P54259 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
ATN1P54259 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.71□□□□□ -1.82
ATN1P54259 SCARNA16.3-201ENST00000516595 184 ntBASIC3.71□□□□□ -1.82
ATN1P54259 SNORA4-201ENST00000584302 138 ntBASIC3.71□□□□□ -1.82
ATN1P54259 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATN1P54259 RNU6-664P-201ENST00000362381 107 ntBASIC3.7□□□□□ -1.82
ATN1P54259 SNORA48.8-201ENST00000391324 134 ntBASIC3.7□□□□□ -1.82
ATN1P54259 MTND4LP1-201ENST00000446263 157 ntBASIC3.7□□□□□ -1.82
ATN1P54259 RN7SL863P-201ENST00000462370 296 ntBASIC3.7□□□□□ -1.82
ATN1P54259 RNU11-2P-201ENST00000516898 142 ntBASIC3.7□□□□□ -1.82
ATN1P54259 SNORA50A-202ENST00000629536 136 ntBASIC3.7□□□□□ -1.82
ATN1P54259 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
ATN1P54259 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATN1P54259 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATN1P54259 AL356274.2-201ENST00000624379 3752 ntBASIC3.69□□□□□ -1.82
ATN1P54259 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ATN1P54259 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
ATN1P54259 RNU6-654P-201ENST00000364373 107 ntBASIC3.69□□□□□ -1.82
ATN1P54259 MIR520C-201ENST00000385005 87 ntBASIC3.69□□□□□ -1.82
ATN1P54259 AC104389.3-201ENST00000445629 235 ntBASIC3.69□□□□□ -1.82
ATN1P54259 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ATN1P54259 MIR5094-201ENST00000578766 85 ntBASIC3.69□□□□□ -1.82
ATN1P54259 MIR4696-201ENST00000581431 70 ntBASIC3.69□□□□□ -1.82
ATN1P54259 AC104984.5-201ENST00000586878 94 ntBASIC3.69□□□□□ -1.82
ATN1P54259 MIR6715A-201ENST00000615929 79 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms