Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 SNORD113-2-201ENST00000391082 72 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 AC004965.1-201ENST00000413033 213 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 MIR3922-201ENST00000585192 84 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD11P31277 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD11P31277 CPHL1P-201ENST00000461341 3407 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD11P31277 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD11P31277 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD11P31277 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD11P31277 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD11P31277 MIR518A2-201ENST00000384966 87 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 MIR2114-201ENST00000516645 80 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 RNU6-922P-201ENST00000516753 99 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 MIR4644-201ENST00000579929 84 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 MIR4769-201ENST00000584126 77 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
HOXD11P31277 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXD11P31277 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD11P31277 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD11P31277 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
HOXD11P31277 SNORD41-201ENST00000386967 70 ntBASIC4.25□□□□□ -1.73
HOXD11P31277 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD11P31277 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
HOXD11P31277 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD11P31277 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXD11P31277 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 SNORA2.1-201ENST00000363089 137 ntBASIC4.24□□□□□ -1.73
HOXD11P31277 RNU4-33P-201ENST00000364316 85 ntBASIC4.24□□□□□ -1.73
HOXD11P31277 SNORA3C-201ENST00000408792 125 ntBASIC4.24□□□□□ -1.73
HOXD11P31277 AC091905.2-201ENST00000623143 306 ntBASIC4.24□□□□□ -1.73
HOXD11P31277 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD11P31277 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD11P31277 AL353746.1-201ENST00000566293 6881 ntBASIC4.23□□□□□ -1.73
HOXD11P31277 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD11P31277 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD11P31277 RNU1-44P-201ENST00000384453 163 ntBASIC4.23□□□□□ -1.73
HOXD11P31277 MIR30B-201ENST00000384850 88 ntBASIC4.23□□□□□ -1.73
HOXD11P31277 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD11P31277 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD11P31277 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD11P31277 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD11P31277 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD11P31277 RNU1-51P-201ENST00000365345 176 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 SNORD6-201ENST00000365444 73 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 RNA5SP95-201ENST00000410319 137 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 RNU7-13P-201ENST00000516413 62 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 RNA5SP519-201ENST00000516480 119 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 SNRPGP19-201ENST00000603826 189 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 U1.36-201ENST00000620684 176 ntBASIC4.22□□□□□ -1.73
HOXD11P31277 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD11P31277 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD11P31277 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD11P31277 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.21□□□□□ -1.73
HOXD11P31277 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXD11P31277 RNU1-14P-201ENST00000362759 152 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 RNU6-580P-201ENST00000365159 107 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 RNU1-148P-201ENST00000384472 162 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 RPS26P2-201ENST00000440331 348 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 AC055731.1-201ENST00000474387 401 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 RNA5SP147-201ENST00000516493 109 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXD11P31277 RNVU1-4-201ENST00000612985 164 ntBASIC4.21□□□□□ -1.74
HOXD11P31277 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD11P31277 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD11P31277 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD11P31277 ZNF658B-202ENST00000615961 3375 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 COTL1P1-201ENST00000422309 375 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 ARF4P2-201ENST00000430209 526 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 RNU7-170P-201ENST00000459303 61 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 SNORA70.14-201ENST00000516205 110 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 IGLV3-26-201ENST00000520756 302 ntBASIC4.2□□□□□ -1.74
HOXD11P31277 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD11P31277 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD11P31277 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD11P31277 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD11P31277 MIR449A-201ENST00000362113 91 ntBASIC4.19□□□□□ -1.74
HOXD11P31277 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD11P31277 RNU6-947P-201ENST00000516264 106 ntBASIC4.19□□□□□ -1.74
HOXD11P31277 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD11P31277 MIR6739-201ENST00000622461 75 ntBASIC4.19□□□□□ -1.74
HOXD11P31277 AC006386.2-201ENST00000624491 75 ntBASIC4.19□□□□□ -1.74
HOXD11P31277 AC012005.1-201ENST00000624575 75 ntBASIC4.19□□□□□ -1.74
HOXD11P31277 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HOXD11P31277 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD11P31277 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD11P31277 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD11P31277 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HOXD11P31277 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD11P31277 SNORA38.1-201ENST00000364172 131 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 RNU6-535P-201ENST00000384722 107 ntBASIC4.18□□□□□ -1.74
HOXD11P31277 Z98941.1-201ENST00000407764 100 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms