Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RNF223E7ERA6 Y_RNA.510-201ENST00000384511 114 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 SNORA67.4-201ENST00000384688 142 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 MIR633-201ENST00000384821 98 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 SNORA48.1-201ENST00000390879 135 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 MIR1283-2-201ENST00000408621 87 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 RNU7-26P-201ENST00000458980 63 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 MIR5004-201ENST00000579078 107 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 AC244205.2-202ENST00000635781 342 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF223E7ERA6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF223E7ERA6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF223E7ERA6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF223E7ERA6 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
RNF223E7ERA6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RNF223E7ERA6 MIR423-201ENST00000362201 94 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 MIR30D-201ENST00000362283 70 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 RNU6-1216P-201ENST00000362590 107 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 SNORD6-201ENST00000365444 73 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 RHEBP3-201ENST00000411920 351 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 MIR3126-201ENST00000577443 74 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 PRELID3BP2-201ENST00000605362 201 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 AL627230.6-201ENST00000611129 280 ntBASIC2.84□□□□□ -1.95
RNF223E7ERA6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RNF223E7ERA6 MIR422A-201ENST00000362286 90 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 SNORD45.1-201ENST00000363181 77 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 Y_RNA.239-201ENST00000364444 113 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 SNORD115-22-201ENST00000364456 82 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 SNORD116-24-201ENST00000384549 92 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RNF223E7ERA6 RNA5SP465-201ENST00000391195 109 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 AL138878.1-201ENST00000405131 347 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 MIR1289-1-201ENST00000408836 144 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF223E7ERA6 HMGN2P3-201ENST00000433603 273 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 HMGN2P5-201ENST00000436882 273 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 RNU6-579P-201ENST00000516879 102 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.83□□□□□ -1.96
RNF223E7ERA6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF223E7ERA6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF223E7ERA6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF223E7ERA6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RNF223E7ERA6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF223E7ERA6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF223E7ERA6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF223E7ERA6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF223E7ERA6 RNA5SP48-201ENST00000363969 126 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 RN7SKP220-201ENST00000410611 288 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 RPS27P16-201ENST00000425758 201 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 MIR6740-201ENST00000618268 113 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF223E7ERA6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF223E7ERA6 ZNF209P-201ENST00000593450 2304 ntBASIC2.82□□□□□ -1.96
RNF223E7ERA6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF223E7ERA6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF223E7ERA6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF223E7ERA6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF223E7ERA6 RNU1-91P-201ENST00000364746 163 ntBASIC2.81□□□□□ -1.96
RNF223E7ERA6 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
RNF223E7ERA6 RPS29P31-201ENST00000446147 164 ntBASIC2.81□□□□□ -1.96
RNF223E7ERA6 MIR2113-201ENST00000459007 91 ntBASIC2.81□□□□□ -1.96
RNF223E7ERA6 RNA5SP137-201ENST00000516833 135 ntBASIC2.81□□□□□ -1.96
RNF223E7ERA6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
RNF223E7ERA6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF223E7ERA6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF223E7ERA6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF223E7ERA6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU4-58P-201ENST00000363192 141 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 SNORA80A-201ENST00000363922 136 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU6-1165P-201ENST00000410119 107 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU6-322P-201ENST00000516010 103 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNU6-531P-201ENST00000516694 104 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 NDUFB9P3-201ENST00000521269 501 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 MIR3124-201ENST00000582636 67 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF223E7ERA6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF223E7ERA6 MAPK10-266ENST00000641066 6555 ntBASIC2.8□□□□□ -1.96
RNF223E7ERA6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF223E7ERA6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RNF223E7ERA6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 SNORD113.1-201ENST00000363280 73 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 RNU6-53P-201ENST00000365367 106 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 AC097510.1-201ENST00000510945 133 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 RNU6-977P-201ENST00000516411 103 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 RNU2-19P-201ENST00000517288 84 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RNF223E7ERA6 MIR7106-201ENST00000612419 65 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 U6.81-201ENST00000612550 106 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 AC069503.3-201ENST00000618674 145 ntBASIC2.79□□□□□ -1.96
RNF223E7ERA6 XIST_intron.1-201ENST00000619444 68 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms