Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNU6-129P-201ENST00000391022 107 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 AL138827.1-201ENST00000402666 306 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 AL513328.1-201ENST00000446460 224 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 RNA5SP217-201ENST00000515959 91 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 SNORD67.1-201ENST00000516618 108 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 MIR8055-201ENST00000610739 97 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 AC012676.2-201ENST00000619258 186 ntBASIC3.91□□□□□ -1.78
PHF8Q9UPP1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PHF8Q9UPP1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
PHF8Q9UPP1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
PHF8Q9UPP1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PHF8Q9UPP1 RNU6-1094P-201ENST00000362416 104 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 Y_RNA.98-201ENST00000363109 102 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 MIR29C-201ENST00000385231 88 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 SNORD28B-201ENST00000390993 75 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 RNU6-602P-201ENST00000411155 105 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 FAM106DP-201ENST00000586416 501 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 AL449363.1-201ENST00000617815 186 ntBASIC3.9□□□□□ -1.79
PHF8Q9UPP1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.9□□□□□ -1.79
PHF8Q9UPP1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PHF8Q9UPP1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PHF8Q9UPP1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PHF8Q9UPP1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHF8Q9UPP1 AC009487.2-201ENST00000420969 6821 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 RNU1-58P-201ENST00000362413 163 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 Y_RNA.168-201ENST00000363740 102 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 RNA5SP138-201ENST00000365098 114 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 RNU6-1031P-201ENST00000384773 107 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 MIR181B2-201ENST00000385004 89 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 MIR1236-201ENST00000408340 102 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 RNU6-1086P-201ENST00000410930 100 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 AC090255.1-201ENST00000495779 349 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 RNU7-79P-201ENST00000516082 62 ntBASIC3.89□□□□□ -1.79
PHF8Q9UPP1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PHF8Q9UPP1 SNORA67.4-201ENST00000384688 142 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 RNU6-1321P-201ENST00000390905 107 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 RNU6-519P-201ENST00000410590 108 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 AC104332.2-201ENST00000429959 156 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 HMGN1P33-201ENST00000432945 451 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 RNU7-48P-201ENST00000458875 63 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 MTND5P40-201ENST00000559945 246 ntBASIC3.88□□□□□ -1.79
PHF8Q9UPP1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.88□□□□□ -1.79
PHF8Q9UPP1 RNA5SP68-201ENST00000363885 119 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 SNORD21-201ENST00000383953 95 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 MIR887-201ENST00000401258 79 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 RNA5SP274-201ENST00000410484 108 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 RNA5SP21-201ENST00000410917 96 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 AC092185.1-201ENST00000491371 97 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 RNU7-137P-201ENST00000516788 62 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 AC104027.1-201ENST00000521887 300 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.87□□□□□ -1.79
PHF8Q9UPP1 MIR8065-201ENST00000620577 100 ntBASIC3.87□□□□□ -1.79
PHF8Q9UPP1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.87□□□□□ -1.79
PHF8Q9UPP1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHF8Q9UPP1 RNU6-461P-201ENST00000364195 107 ntBASIC3.86□□□□□ -1.79
PHF8Q9UPP1 SNORA70B-201ENST00000384210 135 ntBASIC3.86□□□□□ -1.79
PHF8Q9UPP1 MIR6817-201ENST00000615588 66 ntBASIC3.86□□□□□ -1.79
PHF8Q9UPP1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PHF8Q9UPP1 AP000648.3-201ENST00000623539 4507 ntBASIC3.86□□□□□ -1.79
PHF8Q9UPP1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.85□□□□□ -1.79
PHF8Q9UPP1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHF8Q9UPP1 RNU1-109P-201ENST00000383960 147 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PHF8Q9UPP1 AC093850.1-201ENST00000454121 251 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 AC008413.1-201ENST00000511864 177 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 SNORA25.13-201ENST00000516395 103 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 MIR5094-201ENST00000578766 85 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 AP001362.1-201ENST00000625165 124 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 Z97988.1-201ENST00000637697 135 ntBASIC3.85□□□□□ -1.79
PHF8Q9UPP1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PHF8Q9UPP1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.84□□□□□ -1.79
PHF8Q9UPP1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHF8Q9UPP1 SNORA2B-201ENST00000384583 137 ntBASIC3.83□□□□□ -1.8
PHF8Q9UPP1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.83□□□□□ -1.8
PHF8Q9UPP1 RN7SL633P-201ENST00000488974 297 ntBASIC3.83□□□□□ -1.8
PHF8Q9UPP1 RNA5SP148-201ENST00000516527 94 ntBASIC3.83□□□□□ -1.8
PHF8Q9UPP1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.83□□□□□ -1.8
PHF8Q9UPP1 AC020891.4-201ENST00000605745 93 ntBASIC3.83□□□□□ -1.8
PHF8Q9UPP1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
PHF8Q9UPP1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHF8Q9UPP1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PHF8Q9UPP1 SNORD115-3-201ENST00000363100 82 ntBASIC3.82□□□□□ -1.8
PHF8Q9UPP1 AC004223.1-201ENST00000479840 271 ntBASIC3.82□□□□□ -1.8
PHF8Q9UPP1 AC105081.1-201ENST00000617727 106 ntBASIC3.82□□□□□ -1.8
PHF8Q9UPP1 AL513423.1-201ENST00000621695 132 ntBASIC3.82□□□□□ -1.8
PHF8Q9UPP1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.82□□□□□ -1.8
PHF8Q9UPP1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.82□□□□□ -1.8
PHF8Q9UPP1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHF8Q9UPP1 RNU6-624P-201ENST00000363411 107 ntBASIC3.81□□□□□ -1.8
PHF8Q9UPP1 RNU6-380P-201ENST00000410207 107 ntBASIC3.81□□□□□ -1.8
PHF8Q9UPP1 AC087499.7-201ENST00000441958 109 ntBASIC3.81□□□□□ -1.8
PHF8Q9UPP1 RPL23AP6-201ENST00000446637 472 ntBASIC3.81□□□□□ -1.8
PHF8Q9UPP1 SNORD14A-201ENST00000606526 91 ntBASIC3.81□□□□□ -1.8
PHF8Q9UPP1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHF8Q9UPP1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHF8Q9UPP1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHF8Q9UPP1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHF8Q9UPP1 RNU6-478P-201ENST00000363904 110 ntBASIC3.8□□□□□ -1.8
PHF8Q9UPP1 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
PHF8Q9UPP1 RNU7-153P-201ENST00000516455 62 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 356 ms