Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 Y_RNA.659-201ENST00000515994 113 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 RNVU1-2-201ENST00000516326 135 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 MIR548AR-201ENST00000582191 57 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 AC243994.1-201ENST00000618627 109 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 AC025521.1-201ENST00000621624 286 ntBASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM33Q9UPN9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 SNORA1.1-201ENST00000364671 133 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 MIR660-201ENST00000385235 97 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 RNU6-913P-201ENST00000390913 95 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 SNORD28B-201ENST00000390993 75 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 HMGN2P3-201ENST00000433603 273 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 HMGN2P5-201ENST00000436882 273 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 AC093850.1-201ENST00000454121 251 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 SUB1P4-201ENST00000566062 339 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 AC021506.2-201ENST00000612354 169 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 AL512310.12-203ENST00000640543 90 ntBASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
TRIM33Q9UPN9 RNU6-228P-201ENST00000362700 106 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 RNU6-1124P-201ENST00000384169 107 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 RNU6-242P-201ENST00000384359 107 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 SNORD116-22-201ENST00000384430 92 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 MIR518A2-201ENST00000384966 87 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP437-201ENST00000517249 129 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 SNORD3E-202ENST00000627253 216 ntBASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM33Q9UPN9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 SNORA67.1-201ENST00000364749 141 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 SNORD115-35-201ENST00000365122 82 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 MIR526A1-201ENST00000384897 85 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNU2-7P-201ENST00000410794 178 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNU2-40P-201ENST00000410833 196 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RPL39P39-201ENST00000455840 151 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 AC108729.3-201ENST00000513484 108 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP481-201ENST00000516814 122 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 MIR4709-201ENST00000577272 72 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM33Q9UPN9 AP006437.1-201ENST00000641440 3685 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 RNU6-1276P-201ENST00000365372 104 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 SNORA32-201ENST00000384072 121 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 Y_RNA.467-201ENST00000384297 102 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 RNA5SP395-201ENST00000516567 118 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 MIR4325-201ENST00000583049 90 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM33Q9UPN9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TRIM33Q9UPN9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.58□□□□□ -2
TRIM33Q9UPN9 RNU6-112P-201ENST00000363599 104 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 Y_RNA.190-201ENST00000363964 101 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 RNU6-296P-201ENST00000384608 107 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 snoU13.27-201ENST00000459278 104 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 snoU13.16-201ENST00000459350 104 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 AC099513.1-201ENST00000490423 301 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 SNORD14A-201ENST00000606526 91 ntBASIC2.58□□□□□ -2
TRIM33Q9UPN9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM33Q9UPN9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM33Q9UPN9 Y_RNA.73-201ENST00000362910 113 ntBASIC2.57□□□□□ -2
TRIM33Q9UPN9 SNORD116-10-201ENST00000363791 102 ntBASIC2.57□□□□□ -2
TRIM33Q9UPN9 HMGN2P39-201ENST00000398005 273 ntBASIC2.57□□□□□ -2
TRIM33Q9UPN9 RNU6-402P-201ENST00000410678 103 ntBASIC2.57□□□□□ -2
TRIM33Q9UPN9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
TRIM33Q9UPN9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM33Q9UPN9 RNU6-497P-201ENST00000365316 104 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 RNA5SP225-201ENST00000410874 135 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 RNU7-2P-201ENST00000516096 62 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 MIR8055-201ENST00000610739 97 ntBASIC2.56□□□□□ -2
TRIM33Q9UPN9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.56□□□□□ -2
TRIM33Q9UPN9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
TRIM33Q9UPN9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM33Q9UPN9 MIR424-201ENST00000362227 98 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 RNU6-219P-201ENST00000364728 107 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 RNU6-979P-201ENST00000383896 107 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 RNU6-813P-201ENST00000384691 107 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 AC090844.1-201ENST00000422019 156 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 RPL23AP6-201ENST00000446637 472 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 SNORA74.3-201ENST00000517108 154 ntBASIC2.55□□□□□ -2
TRIM33Q9UPN9 MIR5588-201ENST00000581890 63 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms