Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU1-33P-201ENST00000364249 162 ntBASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 TRBV12-2-201ENST00000489763 344 ntBASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 AC008011.1-201ENST00000545989 227 ntBASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 AC008133.2-201ENST00000624540 351 ntBASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 RNU6-369P-201ENST00000362515 102 ntBASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 HMGN2P7-201ENST00000456186 273 ntBASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 RN7SL442P-201ENST00000473804 320 ntBASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 SNORA74.3-201ENST00000517108 154 ntBASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC5.38□□□□□ -1.55
SCAF1Q9H7N4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 SNORA5B-201ENST00000363786 132 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 SNORA80A-201ENST00000363922 136 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 RNY4P3-201ENST00000365254 95 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 RNA5SP117-201ENST00000365294 118 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 SNORA71B-202ENST00000439232 272 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 RNU2-27P-201ENST00000516185 142 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 AC006023.1-201ENST00000603944 259 ntBASIC5.37□□□□□ -1.55
SCAF1Q9H7N4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 MIR449A-201ENST00000362113 91 ntBASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 RNA5SP293-201ENST00000410527 113 ntBASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 MIR3945-201ENST00000581853 98 ntBASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.36□□□□□ -1.55
SCAF1Q9H7N4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCAF1Q9H7N4 GABRG2-229ENST00000641017 3628 ntBASIC5.35□□□□□ -1.55
SCAF1Q9H7N4 RNU6-950P-201ENST00000384651 107 ntBASIC5.35□□□□□ -1.55
SCAF1Q9H7N4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCAF1Q9H7N4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SCAF1Q9H7N4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MIR30E-201ENST00000362104 92 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 RNA5SP374-201ENST00000362939 125 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MIR199A2-201ENST00000385289 110 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MIR466-201ENST00000580653 84 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MIR4672-201ENST00000583126 81 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MIR7112-201ENST00000616126 65 ntBASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCAF1Q9H7N4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.34□□□□□ -1.56
SCAF1Q9H7N4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCAF1Q9H7N4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 RNU6-446P-201ENST00000362827 106 ntBASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 RNU1-101P-201ENST00000391171 127 ntBASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 RNA5SP445-201ENST00000515889 115 ntBASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCAF1Q9H7N4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCAF1Q9H7N4 SNORA26.7-201ENST00000391288 122 ntBASIC5.32□□□□□ -1.56
SCAF1Q9H7N4 MIR5094-201ENST00000578766 85 ntBASIC5.32□□□□□ -1.56
SCAF1Q9H7N4 MIR5089-201ENST00000580047 84 ntBASIC5.32□□□□□ -1.56
SCAF1Q9H7N4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCAF1Q9H7N4 RNU1-109P-201ENST00000383960 147 ntBASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 SNORD105B-201ENST00000458770 79 ntBASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 RNU2-19P-201ENST00000517288 84 ntBASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 AL096861.1-201ENST00000610899 123 ntBASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 MAPK10-373ENST00000641983 6772 ntBASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC5.31□□□□□ -1.56
SCAF1Q9H7N4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 MIR660-201ENST00000385235 97 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 AL023284.1-201ENST00000403956 276 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 MIR1261-201ENST00000408659 82 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 UBL5P2-201ENST00000583788 219 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 MIR7106-201ENST00000612419 65 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 DLEU2_3.2-201ENST00000612883 73 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 AL591424.2-201ENST00000617023 128 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 AL137790.1-201ENST00000634283 177 ntBASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCAF1Q9H7N4 Y_RNA.239-201ENST00000364444 113 ntBASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCAF1Q9H7N4 SNORD63B-201ENST00000411005 70 ntBASIC5.28□□□□□ -1.56
SCAF1Q9H7N4 RNA5SP341-201ENST00000516261 117 ntBASIC5.28□□□□□ -1.56
SCAF1Q9H7N4 RNU7-43P-201ENST00000516554 64 ntBASIC5.28□□□□□ -1.56
SCAF1Q9H7N4 RNA5SP309-201ENST00000516670 106 ntBASIC5.28□□□□□ -1.56
SCAF1Q9H7N4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCAF1Q9H7N4 RNU6-824P-201ENST00000363724 104 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 SNORA48.8-201ENST00000391324 134 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 AC097510.1-201ENST00000510945 133 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 RNA5SP164-201ENST00000516533 110 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 SCARNA16.3-201ENST00000516595 184 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 AC121758.2-201ENST00000553271 193 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 U6.81-201ENST00000612550 106 ntBASIC5.27□□□□□ -1.57
SCAF1Q9H7N4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms