Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR8070-201ENST00000616510 88 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
COL25A1Q9BXS0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 RNA5SP138-201ENST00000365098 114 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 MIR218-1-201ENST00000384999 110 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1321P-201ENST00000390905 107 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 STAG3L5P-204ENST00000443759 179 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 RNU7-73P-201ENST00000458743 63 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 SEM1P1-201ENST00000506694 209 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 SNORD67.1-201ENST00000516618 108 ntBASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
COL25A1Q9BXS0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 RNU6-862P-201ENST00000362804 105 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 SNORD38.2-201ENST00000384470 69 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 Y_RNA.532-201ENST00000384590 113 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 MIR9-1-201ENST00000385198 89 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 CYP2C59P-201ENST00000457790 269 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 MIR7157-201ENST00000635801 60 ntBASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL25A1Q9BXS0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3□□□□□ -1.93
COL25A1Q9BXS0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL25A1Q9BXS0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
COL25A1Q9BXS0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL25A1Q9BXS0 SNORD114-30-201ENST00000364448 72 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 RNU6-649P-201ENST00000384463 107 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3□□□□□ -1.93
COL25A1Q9BXS0 RNA5SP109-201ENST00000391010 116 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 MTND5P40-201ENST00000559945 246 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 SNORA50A-202ENST00000629536 136 ntBASIC3□□□□□ -1.93
COL25A1Q9BXS0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL25A1Q9BXS0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 MIR337-201ENST00000362281 93 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1077P-201ENST00000410506 102 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 AC245047.7-201ENST00000440265 293 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 AC234781.5-201ENST00000508429 271 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 RNA5SP480-201ENST00000516840 109 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 MIR3199-1-201ENST00000582434 88 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 MIR8054-201ENST00000620877 86 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL25A1Q9BXS0 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-161P-201ENST00000363051 106 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-833P-201ENST00000363486 107 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-447P-201ENST00000410293 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1118P-201ENST00000410382 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1076P-201ENST00000410397 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-355P-201ENST00000410427 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-791P-201ENST00000410467 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-705P-201ENST00000410601 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1100P-201ENST00000410691 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-860P-201ENST00000410860 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-1217P-201ENST00000411276 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-785P-201ENST00000411324 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 Y_RNA.660-201ENST00000516002 120 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 RNU6-70P-201ENST00000516438 60 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 SNORA28-201ENST00000606769 126 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 U6.90-201ENST00000614007 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 AC105081.1-201ENST00000617727 106 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 U6.70-201ENST00000620287 104 ntBASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.98□□□□□ -1.93
COL25A1Q9BXS0 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 SNORD114-10-201ENST00000363409 72 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 SNORA25.9-201ENST00000365087 128 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 RNU6-800P-201ENST00000384473 103 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 AC006989.1-201ENST00000427212 131 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 RNU7-48P-201ENST00000458875 63 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 RNU7-137P-201ENST00000516788 62 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 RNU6-667P-201ENST00000517186 102 ntBASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL25A1Q9BXS0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.96□□□□□ -1.93
COL25A1Q9BXS0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms