Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-833P-201ENST00000363486 107 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.205-201ENST00000364128 113 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 SNORD114-6-201ENST00000364393 72 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 MIR218-1-201ENST00000384999 110 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 AC108938.1-201ENST00000451204 136 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 snoU13.11-201ENST00000459219 104 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.660-201ENST00000516002 120 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 MIR4769-201ENST00000584126 77 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 MIR4791-201ENST00000607666 84 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
NKX2-3Q8TAU0 AC007336.1-201ENST00000576365 3828 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 SNORA63.2-201ENST00000362603 126 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 RNA5SP383-201ENST00000362934 120 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 RNA5SP133-201ENST00000363368 119 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.448-201ENST00000384185 108 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 RPS29P6-201ENST00000438196 145 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 AL606517.2-201ENST00000442855 241 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 CKS1BP2-201ENST00000497342 240 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 AC234781.5-201ENST00000508429 271 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 AC107016.2-201ENST00000547968 190 ntBASIC3.47□□□□□ -1.85
NKX2-3Q8TAU0 SNORD114-10-201ENST00000363409 72 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 SNORA2B-201ENST00000384583 137 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-1190P-201ENST00000410811 104 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 STAG3L5P-204ENST00000443759 179 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 SNORD4B-201ENST00000459083 72 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-634P-201ENST00000459134 106 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 AC023141.11-201ENST00000508864 202 ntBASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NKX2-3Q8TAU0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-862P-201ENST00000362804 105 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 Y_RNA.98-201ENST00000363109 102 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 MIR561-201ENST00000385216 97 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-448P-201ENST00000517052 107 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 MIR8054-201ENST00000620877 86 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 MAPK10-266ENST00000641066 6555 ntBASIC3.45□□□□□ -1.86
NKX2-3Q8TAU0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 AP006437.1-201ENST00000641440 3685 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 RNA5SP138-201ENST00000365098 114 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 MIR592-201ENST00000384959 97 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-913P-201ENST00000390913 95 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 RNU1-41P-201ENST00000516161 162 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 RNU1-48P-201ENST00000516400 162 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 MTND5P40-201ENST00000559945 246 ntBASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-3Q8TAU0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 SNORD21-201ENST00000383953 95 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-342P-201ENST00000384521 104 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-160P-201ENST00000384591 107 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 MIR196B-201ENST00000384852 84 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-1321P-201ENST00000390905 107 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 SNORD67.1-201ENST00000516618 108 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 AC245166.1-201ENST00000521012 253 ntBASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX2-3Q8TAU0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-649P-201ENST00000384463 107 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 SNORA26.7-201ENST00000391288 122 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 AC245047.7-201ENST00000440265 293 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-687P-201ENST00000516443 89 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-667P-201ENST00000517186 102 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 MIR1297-201ENST00000637311 77 ntBASIC3.42□□□□□ -1.86
NKX2-3Q8TAU0 SNORA25.9-201ENST00000365087 128 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 Y_RNA.354-201ENST00000365448 111 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 RNA5SP109-201ENST00000391010 116 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 RNU6-602P-201ENST00000411155 105 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 AC087499.2-201ENST00000432861 149 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 RNU7-48P-201ENST00000458875 63 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 FGF7P7-201ENST00000514120 227 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 Y_RNA.681-201ENST00000516445 113 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 AL512598.1-201ENST00000610158 273 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 AC243994.1-201ENST00000618627 109 ntBASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NKX2-3Q8TAU0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NKX2-3Q8TAU0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NKX2-3Q8TAU0 RNU1-112P-201ENST00000364401 164 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 MIR887-201ENST00000401258 79 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 MTND4LP19-201ENST00000403051 166 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 RNU6-1086P-201ENST00000410930 100 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 AC003685.2-201ENST00000422795 395 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 RNU7-79P-201ENST00000516082 62 ntBASIC3.4□□□□□ -1.87
NKX2-3Q8TAU0 RNU7-137P-201ENST00000516788 62 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms