Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RETREG2Q8NC44 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RETREG2Q8NC44 SNORA67.3-201ENST00000384366 140 ntBASIC2.6□□□□□ -1.99
RETREG2Q8NC44 AL023284.1-201ENST00000403956 276 ntBASIC2.6□□□□□ -1.99
RETREG2Q8NC44 RNA5SP136-201ENST00000410906 107 ntBASIC2.6□□□□□ -1.99
RETREG2Q8NC44 MIR8063-201ENST00000621930 81 ntBASIC2.6□□□□□ -1.99
RETREG2Q8NC44 MIR376A2-201ENST00000636782 80 ntBASIC2.6□□□□□ -1.99
RETREG2Q8NC44 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RETREG2Q8NC44 RNU1-133P-201ENST00000364867 167 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 Y_RNA.351-201ENST00000365436 96 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 SNORD116-21-201ENST00000384507 92 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 RNU6-482P-201ENST00000391068 107 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 AC063976.4-201ENST00000421971 163 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 MIR5007-201ENST00000583098 95 ntBASIC2.59□□□□□ -1.99
RETREG2Q8NC44 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RETREG2Q8NC44 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.59□□□□□ -1.99
RETREG2Q8NC44 MTND5P18-201ENST00000445624 1801 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 RNU6-880P-201ENST00000384526 107 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 Y_RNA.537-201ENST00000384626 109 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 MIR676-201ENST00000390702 67 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 RNA5SP489-201ENST00000410986 109 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 AL035398.1-201ENST00000430869 322 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 HSPE1P24-201ENST00000450782 238 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 RNU7-53P-201ENST00000516705 60 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 IGKV1-22-201ENST00000524313 326 ntBASIC2.58□□□□□ -2
RETREG2Q8NC44 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.58□□□□□ -2
RETREG2Q8NC44 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.58□□□□□ -2
RETREG2Q8NC44 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RETREG2Q8NC44 RNU6-1065P-201ENST00000384513 106 ntBASIC2.57□□□□□ -2
RETREG2Q8NC44 Y_RNA.649-201ENST00000459077 103 ntBASIC2.57□□□□□ -2
RETREG2Q8NC44 RNU6-998P-201ENST00000515894 101 ntBASIC2.57□□□□□ -2
RETREG2Q8NC44 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.57□□□□□ -2
RETREG2Q8NC44 AL137067.1-201ENST00000615933 120 ntBASIC2.57□□□□□ -2
RETREG2Q8NC44 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
RETREG2Q8NC44 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.56□□□□□ -2
RETREG2Q8NC44 MIR302B-201ENST00000362188 73 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 SNORA63.4-201ENST00000362763 126 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 RPS29P29-201ENST00000456396 171 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.56□□□□□ -2
RETREG2Q8NC44 COX6CP6-201ENST00000490840 228 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 AC008834.1-201ENST00000511612 175 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.56□□□□□ -2
RETREG2Q8NC44 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
RETREG2Q8NC44 AL391516.1-201ENST00000554380 2449 ntBASIC2.56□□□□□ -2
RETREG2Q8NC44 MIR520C-201ENST00000385005 87 ntBASIC2.55□□□□□ -2
RETREG2Q8NC44 SNX2P2-201ENST00000424553 323 ntBASIC2.55□□□□□ -2
RETREG2Q8NC44 AC079140.2-201ENST00000506193 142 ntBASIC2.55□□□□□ -2
RETREG2Q8NC44 MIR548AR-201ENST00000582191 57 ntBASIC2.55□□□□□ -2
RETREG2Q8NC44 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RETREG2Q8NC44 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RETREG2Q8NC44 Y_RNA.35-201ENST00000362601 101 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 SNORA22-201ENST00000383907 134 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 Y_RNA.528-201ENST00000384575 108 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 MIR1263-201ENST00000408324 86 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 RNU7-67P-201ENST00000459003 62 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 SNORD111.1-201ENST00000516421 86 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 RNU6-250P-201ENST00000516958 103 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 MIR4764-201ENST00000580680 88 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 AC091932.4-201ENST00000623386 200 ntBASIC2.54□□□□□ -2
RETREG2Q8NC44 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RETREG2Q8NC44 MIRLET7G-201ENST00000362280 84 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 Y_RNA.366-201ENST00000365540 102 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 SNORA24-201ENST00000384096 131 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 MIR570-201ENST00000384917 97 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 RNU2-13P-201ENST00000515909 113 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 RNU6-922P-201ENST00000516753 99 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.53□□□□□ -2
RETREG2Q8NC44 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
RETREG2Q8NC44 GHRLOS.1-201ENST00000610995 70 ntBASIC2.53□□□□□ -2
RETREG2Q8NC44 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RETREG2Q8NC44 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RETREG2Q8NC44 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RETREG2Q8NC44 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RETREG2Q8NC44 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RETREG2Q8NC44 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RETREG2Q8NC44 MIR302D-201ENST00000362275 68 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 RNA5SP99-201ENST00000364020 114 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 SNORA51.10-201ENST00000384418 136 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 RPL30P7-201ENST00000479312 323 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 RNU6-548P-201ENST00000517083 115 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 MIR4422-201ENST00000581938 83 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 AC243994.1-201ENST00000618627 109 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 AL353997.5-201ENST00000618886 171 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 AC008133.2-201ENST00000624540 351 ntBASIC2.52□□□□□ -2.01
RETREG2Q8NC44 RNU6-349P-201ENST00000362402 107 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 RNY1P6-201ENST00000384193 109 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 SNORD28B-201ENST00000390993 75 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 RNA5SP261-201ENST00000410536 106 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 RPL39P39-201ENST00000455840 151 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 AC005908.1-201ENST00000468701 347 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 RNU6-240P-201ENST00000516098 97 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 RNU6-412P-201ENST00000516434 106 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 MIR4791-201ENST00000607666 84 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RETREG2Q8NC44 AL596211.1-201ENST00000569873 2277 ntBASIC2.51□□□□□ -2.01
RETREG2Q8NC44 AP000648.3-201ENST00000623539 4507 ntBASIC2.5□□□□□ -2.01
RETREG2Q8NC44 MIR342-201ENST00000362212 99 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms