Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC131280.1-202ENST00000624067 4211 ntBASIC1.96□□□□□ -2.1
VRK3Q8IV63 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
VRK3Q8IV63 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
VRK3Q8IV63 RNU6-294P-201ENST00000364999 102 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 RNU6-950P-201ENST00000384651 107 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 AL034345.1-201ENST00000407768 123 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 AL035398.1-201ENST00000430869 322 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 RNU6-109P-201ENST00000516364 107 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 RNU6-184P-201ENST00000516514 107 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
VRK3Q8IV63 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
VRK3Q8IV63 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 AC087741.2-201ENST00000619415 172 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 AC021613.1-201ENST00000623880 111 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.95□□□□□ -2.1
VRK3Q8IV63 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
VRK3Q8IV63 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VRK3Q8IV63 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VRK3Q8IV63 Y_RNA.241-201ENST00000364470 117 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 MIR488-201ENST00000365739 83 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 RNU6-1031P-201ENST00000384773 107 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 SNORA19.1-201ENST00000410656 129 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 POLR2J4-204ENST00000418424 324 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.94□□□□□ -2.1
VRK3Q8IV63 MTATP8P2-201ENST00000435212 202 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VRK3Q8IV63 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 RPS23P4-201ENST00000487908 423 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 RNU2-13P-201ENST00000515909 113 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 RNU6-844P-201ENST00000517175 102 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
VRK3Q8IV63 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
VRK3Q8IV63 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
VRK3Q8IV63 MIR302B-201ENST00000362188 73 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU6-661P-201ENST00000362409 107 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 SNORD115-19-201ENST00000363098 82 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 SNORD115-18-201ENST00000363293 82 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 SNORD115-17-201ENST00000364612 82 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU6-1131P-201ENST00000364955 107 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 Y_RNA.531-201ENST00000384589 121 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 AL512326.2-201ENST00000426359 151 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU6-970P-201ENST00000516312 107 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 AC004812.1-201ENST00000540773 146 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 MIR3126-201ENST00000577443 74 ntBASIC1.93□□□□□ -2.1
VRK3Q8IV63 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VRK3Q8IV63 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VRK3Q8IV63 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
VRK3Q8IV63 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.92□□□□□ -2.1
VRK3Q8IV63 SNORA4.2-201ENST00000365313 147 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 MIR518A2-201ENST00000384966 87 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNU6-816P-201ENST00000390914 107 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNU6-1268P-201ENST00000391214 107 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNU6-1239P-201ENST00000391310 107 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 MIR1912-201ENST00000410389 80 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 snoU13.26-201ENST00000459452 105 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNVU1-2-201ENST00000516326 135 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNU7-6P-201ENST00000516845 62 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 RNU7-181P-201ENST00000517234 74 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 AC090821.2-201ENST00000523552 176 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 MIR2052-201ENST00000636055 55 ntBASIC1.92□□□□□ -2.1
VRK3Q8IV63 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
VRK3Q8IV63 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VRK3Q8IV63 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VRK3Q8IV63 MIR342-201ENST00000362212 99 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 SNORD115-2-201ENST00000362842 82 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 Y_RNA.93-201ENST00000363066 109 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU4-16P-201ENST00000364737 141 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 SNORD115-20-201ENST00000365099 82 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 SNORA24-201ENST00000384096 131 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 Y_RNA.466-201ENST00000384294 113 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6-296P-201ENST00000384608 107 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6-1319P-201ENST00000390855 104 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6-747P-201ENST00000390928 104 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6-241P-201ENST00000391148 104 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 RNU6-177P-201ENST00000411257 104 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 SNX2P2-201ENST00000424553 323 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 HMGN2P3-201ENST00000433603 273 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 HMGN2P5-201ENST00000436882 273 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 AC095038.3-201ENST00000634439 195 ntBASIC1.91□□□□□ -2.1
VRK3Q8IV63 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
VRK3Q8IV63 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VRK3Q8IV63 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VRK3Q8IV63 RNU6-1099P-201ENST00000363533 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms