Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR548AE2-201ENST00000583456 67 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 MIR4791-201ENST00000607666 84 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-616P-201ENST00000384353 107 ntBASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 RN7SKP223-201ENST00000410582 62 ntBASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.659-201ENST00000515994 113 ntBASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 RNVU1-2-201ENST00000516326 135 ntBASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
PRPF38BQ5VTL8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 SNORD115-2-201ENST00000362842 82 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 SNORD115-20-201ENST00000365099 82 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.470-201ENST00000384307 117 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 RNU4-53P-201ENST00000410828 140 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 MIR1270-201ENST00000459320 83 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 AC139453.2-201ENST00000487255 133 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 MIR4709-201ENST00000577272 72 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF38BQ5VTL8 AL442644.1-201ENST00000454390 3105 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 SNORD114-1-201ENST00000362705 72 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.426-201ENST00000384068 113 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 RNA5SP465-201ENST00000391195 109 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 RNU2-40P-201ENST00000410833 196 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-1018P-201ENST00000516577 106 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 AC243994.1-201ENST00000618627 109 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 AC006160.2-201ENST00000637708 154 ntBASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF38BQ5VTL8 RNY1P4-201ENST00000384595 115 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-1067P-201ENST00000384752 107 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 MIR1283-2-201ENST00000408621 87 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 AC011753.1-201ENST00000451001 220 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 SCARNA16.3-201ENST00000516595 184 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 AL512310.12-203ENST00000640543 90 ntBASIC3.21□□□□□ -1.9
PRPF38BQ5VTL8 MIR30E-201ENST00000362104 92 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-776P-201ENST00000364403 104 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-1022P-201ENST00000365049 104 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 SNORA32-201ENST00000384072 121 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR518A2-201ENST00000384966 87 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 AC073261.1-201ENST00000429409 121 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 SNORD123-201ENST00000459473 70 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 RNA5SP437-201ENST00000517249 129 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR548AR-201ENST00000582191 57 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 AC021506.2-201ENST00000612354 169 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR6717-201ENST00000622747 73 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 SNORD3E-202ENST00000627253 216 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR4662A-201ENST00000637499 67 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF38BQ5VTL8 MIR337-201ENST00000362281 93 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 SNORD28B-201ENST00000390993 75 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-1190P-201ENST00000410811 104 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 AC096720.1-201ENST00000604441 183 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 AL513423.1-201ENST00000621695 132 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 MIR6841-201ENST00000637129 72 ntBASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF38BQ5VTL8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-652P-201ENST00000365488 107 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 SNORD58A-201ENST00000383875 65 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 Y_RNA.611-201ENST00000410682 108 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 AL020996.3-201ENST00000606617 222 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF38BQ5VTL8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-1313P-201ENST00000362622 102 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 SNORD116-10-201ENST00000363791 102 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 Y_RNA.191-201ENST00000363972 113 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 MIR660-201ENST00000385235 97 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 SNORA48.1-201ENST00000390879 135 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 RNU6-913P-201ENST00000390913 95 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 U8.15-201ENST00000390947 134 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 SNORA26.6-201ENST00000391256 115 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 RNU7-73P-201ENST00000458743 63 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 snoU13.27-201ENST00000459278 104 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 RN7SL20P-201ENST00000488827 297 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.17□□□□□ -1.9
PRPF38BQ5VTL8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 SNORA24-201ENST00000384096 131 ntBASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 RNA5SP492-201ENST00000411330 114 ntBASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 RNA5SP481-201ENST00000516814 122 ntBASIC3.16□□□□□ -1.9
PRPF38BQ5VTL8 MIR548BB-201ENST00000626714 66 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms