Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNA5SP320-201ENST00000516263 124 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 RNU7-53P-201ENST00000516705 60 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 RNU6-958P-201ENST00000516995 106 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 DNAJC19P9-201ENST00000555084 351 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 MIR4524B-201ENST00000581569 115 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 SNORA28-201ENST00000606769 126 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 U4.3-201ENST00000621047 82 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 MIR6717-201ENST00000622747 73 ntBASIC3.34□□□□□ -1.87
RC3H1Q5TC82 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.34□□□□□ -1.88
RC3H1Q5TC82 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.33□□□□□ -1.88
RC3H1Q5TC82 RNU6-1244P-201ENST00000363614 108 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 RNU4-53P-201ENST00000410828 140 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.33□□□□□ -1.88
RC3H1Q5TC82 AC023141.11-201ENST00000508864 202 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 MIR4769-201ENST00000584126 77 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 MIR8054-201ENST00000620877 86 ntBASIC3.33□□□□□ -1.88
RC3H1Q5TC82 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RC3H1Q5TC82 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
RC3H1Q5TC82 Y_RNA.370-201ENST00000365589 108 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 RNU6-1072P-201ENST00000384703 107 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 RNU6-443P-201ENST00000384780 107 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 RPL31P63-201ENST00000422565 375 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 UBBP3-201ENST00000445497 241 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 RNU7-67P-201ENST00000459003 62 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 U7.4-201ENST00000614961 63 ntBASIC3.32□□□□□ -1.88
RC3H1Q5TC82 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.32□□□□□ -1.88
RC3H1Q5TC82 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RC3H1Q5TC82 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RC3H1Q5TC82 AC131280.1-202ENST00000624067 4211 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RC3H1Q5TC82 SNORA68.1-201ENST00000364537 132 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 Y_RNA.545-201ENST00000384652 105 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 Y_RNA.567-201ENST00000384736 106 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 AC003685.2-201ENST00000422795 395 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 SEM1P1-201ENST00000506694 209 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.31□□□□□ -1.88
RC3H1Q5TC82 AC140658.3-201ENST00000567603 271 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.31□□□□□ -1.88
RC3H1Q5TC82 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RC3H1Q5TC82 AC245060.5-201ENST00000610778 3293 ntBASIC3.31□□□□□ -1.88
RC3H1Q5TC82 AC007336.1-201ENST00000576365 3828 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 U8.9-201ENST00000365667 134 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RNA5SP425-201ENST00000410336 112 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RNU6-613P-201ENST00000410412 108 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RNU6-1190P-201ENST00000410811 104 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RPS29P6-201ENST00000438196 145 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RPS29P28-201ENST00000446439 141 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 RNU6-826P-201ENST00000516827 104 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 MIR4791-201ENST00000607666 84 ntBASIC3.3□□□□□ -1.88
RC3H1Q5TC82 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.3□□□□□ -1.88
RC3H1Q5TC82 MIR34C-201ENST00000384831 77 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 MIR206-201ENST00000384872 86 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RC3H1Q5TC82 RNU6-1307P-201ENST00000391012 103 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 RPS29P29-201ENST00000456396 171 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 MIR4648-201ENST00000580107 72 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 SNORD3E-202ENST00000627253 216 ntBASIC3.29□□□□□ -1.88
RC3H1Q5TC82 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
RC3H1Q5TC82 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RC3H1Q5TC82 RNU6-833P-201ENST00000363486 107 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 SNORD115-37-201ENST00000363768 82 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 SNORA25B-201ENST00000365507 128 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 SNORA24-201ENST00000384096 131 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 MIR548G-201ENST00000408442 89 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 RNA5SP344-201ENST00000411081 104 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
RC3H1Q5TC82 RNU1-98P-201ENST00000458992 160 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 AC090255.1-201ENST00000495779 349 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 RNU6-90P-201ENST00000606352 106 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.28□□□□□ -1.88
RC3H1Q5TC82 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RC3H1Q5TC82 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RC3H1Q5TC82 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RC3H1Q5TC82 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RC3H1Q5TC82 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RC3H1Q5TC82 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.27□□□□□ -1.89
RC3H1Q5TC82 RNU6-315P-201ENST00000362666 107 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 RNA5SP493-201ENST00000364115 91 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 RN7SKP223-201ENST00000410582 62 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 RN7SL499P-201ENST00000481141 276 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 AC114801.3-201ENST00000510231 177 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 SNORA9.3-201ENST00000516383 129 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 MIR4635-201ENST00000583759 79 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 AL020996.3-201ENST00000606617 222 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.27□□□□□ -1.89
RC3H1Q5TC82 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.27□□□□□ -1.89
RC3H1Q5TC82 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RC3H1Q5TC82 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 RNU6-590P-201ENST00000365039 107 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 MIR1262-201ENST00000408276 93 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.26□□□□□ -1.89
RC3H1Q5TC82 RNU7-73P-201ENST00000458743 63 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms