Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 MIR570-201ENST00000384917 97 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 RPS29P29-201ENST00000456396 171 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 MIR4791-201ENST00000607666 84 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
ATP13A4Q4VNC1 U8.1-201ENST00000362843 134 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 SNORD50.2-201ENST00000365465 70 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 SNORA24-201ENST00000384096 131 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 MIR613-201ENST00000385248 95 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 MTATP6P21-201ENST00000440681 189 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 RNU7-67P-201ENST00000459003 62 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 RNA5SP272-201ENST00000516095 111 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 RNU7-70P-201ENST00000516941 66 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 MIR3664-201ENST00000579074 99 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 AC243994.1-201ENST00000618627 109 ntBASIC1.8□□□□□ -2.12
ATP13A4Q4VNC1 AC010332.2-201ENST00000613083 1904 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 SNORA51.10-201ENST00000384418 136 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 SNORA20-201ENST00000384662 132 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 RNU6-998P-201ENST00000515894 101 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 RNA5SP236-201ENST00000516169 116 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 RNU2-60P-201ENST00000517290 128 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AP001328.1-201ENST00000528550 176 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AL512310.8-201ENST00000550183 120 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 AP001340.1-201ENST00000624405 217 ntBASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
ATP13A4Q4VNC1 MIR342-201ENST00000362212 99 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 AL035398.1-201ENST00000430869 322 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 AL392103.1-201ENST00000447000 198 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 RPL39P39-201ENST00000455840 151 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 RNU6-947P-201ENST00000516264 106 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 RNU7-53P-201ENST00000516705 60 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 AL096861.1-201ENST00000610899 123 ntBASIC1.78□□□□□ -2.12
ATP13A4Q4VNC1 AP000648.3-201ENST00000623539 4507 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-704P-201ENST00000364162 103 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 RNU1-133P-201ENST00000364867 167 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-915P-201ENST00000364943 103 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 AL603914.1-201ENST00000401964 204 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 MIR3192-201ENST00000584920 77 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 AC091932.4-201ENST00000623386 200 ntBASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ATP13A4Q4VNC1 MIR302B-201ENST00000362188 73 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 RNA5SP48-201ENST00000363969 126 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 RNU2-11P-201ENST00000459191 187 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 Y_RNA.690-201ENST00000516603 95 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 AP001485.1-201ENST00000604799 199 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 AL121890.5-201ENST00000620848 304 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 MIR4251-201ENST00000635819 61 ntBASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ATP13A4Q4VNC1 AL596211.1-201ENST00000569873 2277 ntBASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 SNORA40-201ENST00000388090 126 ntBASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-482P-201ENST00000391068 107 ntBASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 RNU7-73P-201ENST00000458743 63 ntBASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 AC091895.1-201ENST00000624494 256 ntBASIC1.75□□□□□ -2.13
ATP13A4Q4VNC1 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-257P-201ENST00000410238 98 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 MTND4LP9-201ENST00000427694 174 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 snoU13.16-201ENST00000459350 104 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 Y_RNA.692-201ENST00000516627 105 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-165P-201ENST00000517170 99 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 U7.2-201ENST00000607576 63 ntBASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ATP13A4Q4VNC1 RNU6-309P-201ENST00000364573 106 ntBASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 AL022345.2-201ENST00000606307 135 ntBASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 TUG1_4.1-201ENST00000619464 181 ntBASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.73□□□□□ -2.13
ATP13A4Q4VNC1 Y_RNA.586-201ENST00000391146 98 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 TMSB4XP3-201ENST00000445144 114 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 RN7SKP88-201ENST00000516847 250 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 7SK.8-201ENST00000612110 250 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 7SK.11-201ENST00000615477 250 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 7SK.13-201ENST00000622040 250 ntBASIC1.72□□□□□ -2.13
ATP13A4Q4VNC1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
ATP13A4Q4VNC1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 411.1 ms