Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 AP000648.3-201ENST00000623539 4507 ntBASIC3.29□□□□□ -1.88
CTC1Q2NKJ3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 AC062016.1-201ENST00000355719 319 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 RNA5SP133-201ENST00000363368 119 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 SNORD15B-201ENST00000384714 146 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 MIR1261-201ENST00000408659 82 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 RNU6-1086P-201ENST00000410930 100 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 SRIP3-201ENST00000413200 219 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 RNU6-807P-201ENST00000516805 107 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 RNU7-35P-201ENST00000517174 62 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 AC024995.1-201ENST00000523014 93 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 MIR4506-201ENST00000584693 77 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 AL449363.1-201ENST00000617815 186 ntBASIC3.28□□□□□ -1.88
CTC1Q2NKJ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CTC1Q2NKJ3 SNORA25.9-201ENST00000365087 128 ntBASIC3.27□□□□□ -1.89
CTC1Q2NKJ3 RPS29P29-201ENST00000456396 171 ntBASIC3.27□□□□□ -1.89
CTC1Q2NKJ3 RNA5SP217-201ENST00000515959 91 ntBASIC3.27□□□□□ -1.89
CTC1Q2NKJ3 RNU7-28P-201ENST00000516759 62 ntBASIC3.27□□□□□ -1.89
CTC1Q2NKJ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CTC1Q2NKJ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 MIRLET7C-201ENST00000362160 84 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 SNORD114-6-201ENST00000364393 72 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 SNORA1.2-201ENST00000365189 134 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 RNU6-499P-201ENST00000365615 107 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 MIR515-2-201ENST00000384883 83 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 MIR515-1-201ENST00000384884 83 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 MIR516B2-201ENST00000385190 85 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 RNA5SP109-201ENST00000391010 116 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 Y_RNA.596-201ENST00000410462 109 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 RNU7-85P-201ENST00000458851 63 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 RNU7-48P-201ENST00000458875 63 ntBASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTC1Q2NKJ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 RNU6-862P-201ENST00000362804 105 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 SNORA46-201ENST00000384762 135 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 RNU6-663P-201ENST00000391105 106 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 RNU2-48P-201ENST00000410694 191 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 FGF7P7-201ENST00000514120 227 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.25□□□□□ -1.89
CTC1Q2NKJ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 RNU5F-1-201ENST00000362507 117 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 AC093423.1-201ENST00000440817 142 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 Y_RNA.660-201ENST00000516002 120 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 RNU7-137P-201ENST00000516788 62 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 MIR4435-1-201ENST00000582552 80 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
CTC1Q2NKJ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 SNORD115-31-201ENST00000365318 82 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 AC003685.2-201ENST00000422795 395 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 CST2P1-201ENST00000425770 87 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 CST9LP2-201ENST00000437612 320 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 RNU7-79P-201ENST00000516082 62 ntBASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTC1Q2NKJ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 Y_RNA.98-201ENST00000363109 102 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 RNU6-1241P-201ENST00000384536 107 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 MIR154-201ENST00000385243 84 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 RNU6-220P-201ENST00000390919 107 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 RNA5SP292-201ENST00000390974 118 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 RNU6-602P-201ENST00000411155 105 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 AC027279.3-201ENST00000625055 122 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 MIR1297-201ENST00000637311 77 ntBASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CTC1Q2NKJ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 RNU7-73P-201ENST00000458743 63 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 RNU6-667P-201ENST00000517186 102 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 MIR8066-201ENST00000617280 78 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 AC243994.1-201ENST00000618627 109 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 AP001362.1-201ENST00000625165 124 ntBASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CTC1Q2NKJ3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 SNORD114-10-201ENST00000363409 72 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 SNORA24-201ENST00000384096 131 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms