Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-1337P-201ENST00000516525 95 ntBASIC-3.22□□□□□ -2.92
TFF3Q07654 AL359881.1-201ENST00000602916 267 ntBASIC-3.22□□□□□ -2.92
TFF3Q07654 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.23□□□□□ -2.93
TFF3Q07654 MIR519A1-201ENST00000385257 85 ntBASIC-3.23□□□□□ -2.93
TFF3Q07654 MIR190B-201ENST00000401119 79 ntBASIC-3.23□□□□□ -2.93
TFF3Q07654 RNU6-850P-201ENST00000516934 103 ntBASIC-3.23□□□□□ -2.93
TFF3Q07654 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-3.23□□□□□ -2.93
TFF3Q07654 RNU6-280P-201ENST00000364145 104 ntBASIC-3.24□□□□□ -2.93
TFF3Q07654 SNORA27-201ENST00000384323 126 ntBASIC-3.24□□□□□ -2.93
TFF3Q07654 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-3.24□□□□□ -2.93
TFF3Q07654 MTND1P12-201ENST00000455231 147 ntBASIC-3.24□□□□□ -2.93
TFF3Q07654 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.24□□□□□ -2.93
TFF3Q07654 RNY1P2-201ENST00000364820 117 ntBASIC-3.25□□□□□ -2.93
TFF3Q07654 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-3.25□□□□□ -2.93
TFF3Q07654 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-3.25□□□□□ -2.93
TFF3Q07654 MIR466-201ENST00000580653 84 ntBASIC-3.25□□□□□ -2.93
TFF3Q07654 AP001542.1-201ENST00000591314 200 ntBASIC-3.25□□□□□ -2.93
TFF3Q07654 U6.109-201ENST00000636749 87 ntBASIC-3.25□□□□□ -2.93
TFF3Q07654 AL445984.1-201ENST00000637834 659 ntBASIC-3.25□□□□□ -2.93
TFF3Q07654 Y_RNA.23-201ENST00000362496 106 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 SNORD113-7-201ENST00000363762 77 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 MIR582-201ENST00000365731 98 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 Y_RNA.408-201ENST00000383987 102 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 ELOCP20-201ENST00000422460 345 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 AC097510.1-201ENST00000510945 133 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 RNU7-25P-201ENST00000516544 62 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 RNU6-1006P-201ENST00000516998 103 ntBASIC-3.26□□□□□ -2.93
TFF3Q07654 SNORA72.3-201ENST00000365074 132 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 Y_RNA.331-201ENST00000365267 102 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 RNU6-1086P-201ENST00000410930 100 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 MIR2113-201ENST00000459007 91 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 RNU6-397P-201ENST00000516226 104 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 RN7SKP299-201ENST00000606679 301 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 AL008718.3-201ENST00000610217 321 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 AL158209.2-201ENST00000619266 216 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-3.27□□□□□ -2.93
TFF3Q07654 RNU6-208P-201ENST00000362431 107 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RNU6-1260P-201ENST00000362944 107 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RNU6-715P-201ENST00000365204 103 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 Y_RNA.364-201ENST00000365532 101 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 Y_RNA.481-201ENST00000384373 102 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RNU6-1106P-201ENST00000390845 107 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 AL603910.2-201ENST00000407268 136 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RNU6-757P-201ENST00000410334 100 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RPS27AP14-201ENST00000422868 454 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-3.28□□□□□ -2.93
TFF3Q07654 MIR4789-201ENST00000577469 82 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-3.28□□□□□ -2.93
TFF3Q07654 AC019226.2-201ENST00000625973 424 ntBASIC-3.28□□□□□ -2.93
TFF3Q07654 RNU6-924P-201ENST00000362926 108 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 SNORD56.2-201ENST00000363242 71 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 Y_RNA.123-201ENST00000363338 102 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 Y_RNA.319-201ENST00000365138 92 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 Y_RNA.340-201ENST00000365330 92 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 AL353691.2-201ENST00000443795 59 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 RNU7-96P-201ENST00000459535 64 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.29□□□□□ -2.94
TFF3Q07654 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.29□□□□□ -2.94
TFF3Q07654 RNU6-998P-201ENST00000515894 101 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 JPX_2.1-201ENST00000614161 69 ntBASIC-3.29□□□□□ -2.94
TFF3Q07654 RNU6-769P-201ENST00000384407 104 ntBASIC-3.3□□□□□ -2.94
TFF3Q07654 RNU4-88P-201ENST00000411220 86 ntBASIC-3.3□□□□□ -2.94
TFF3Q07654 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.3□□□□□ -2.94
TFF3Q07654 AC092574.1-201ENST00000609771 420 ntBASIC-3.3□□□□□ -2.94
TFF3Q07654 MIR410-201ENST00000362222 80 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 SNORD115-32-201ENST00000364079 82 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 Y_RNA.396-201ENST00000383949 103 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 SNORA51.5-201ENST00000384126 131 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 RNU6-393P-201ENST00000384475 107 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 RNU6-429P-201ENST00000384582 108 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 SNORD70.1-201ENST00000391007 85 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 RNU6-337P-201ENST00000391243 106 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-3.31□□□□□ -2.94
TFF3Q07654 Y_RNA.665-201ENST00000516177 98 ntBASIC-3.31□□□□□ -2.94
TFF3Q07654 RNU6-79P-201ENST00000362511 107 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 Y_RNA.243-201ENST00000364481 109 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 SNORD72-201ENST00000390994 80 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 MTND3P9-201ENST00000429526 346 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 RPL39P5-202ENST00000512505 151 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 MTCO3P39-201ENST00000514812 518 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 PIGPP4-201ENST00000584447 307 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 MIR6888-201ENST00000621977 67 ntBASIC-3.32□□□□□ -2.94
TFF3Q07654 RNU4-10P-201ENST00000364383 140 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 RNU6-169P-201ENST00000365336 107 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 RNU6-841P-201ENST00000383872 107 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 RNU6-159P-201ENST00000391080 106 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 AC018880.2-201ENST00000414265 201 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-3.33□□□□□ -2.94
TFF3Q07654 AC107934.1-201ENST00000522215 217 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 AC098479.1-201ENST00000609225 154 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 AL607023.1-201ENST00000620045 248 ntBASIC-3.33□□□□□ -2.94
TFF3Q07654 U6.112-201ENST00000384129 70 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 MIR548O-201ENST00000408583 114 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 MIR548H3-201ENST00000408771 118 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 AC023449.1-201ENST00000454464 154 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 SEPT14P4-201ENST00000513445 186 ntBASIC-3.34□□□□□ -2.94
TFF3Q07654 RNU6-1333P-201ENST00000516162 93 ntBASIC-3.34□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 310.3 ms