Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXD11P31277 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD11P31277 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 RNA5SP50-201ENST00000363731 107 ntBASIC4.35□□□□□ -1.71
HOXD11P31277 RNU6-35P-201ENST00000384530 107 ntBASIC4.35□□□□□ -1.71
HOXD11P31277 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD11P31277 AC020914.4-201ENST00000597690 277 ntBASIC4.35□□□□□ -1.71
HOXD11P31277 MIR6500-201ENST00000622700 86 ntBASIC4.35□□□□□ -1.71
HOXD11P31277 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD11P31277 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HOXD11P31277 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD11P31277 MIR377-201ENST00000362145 69 ntBASIC4.34□□□□□ -1.71
HOXD11P31277 SNORA60-201ENST00000362396 134 ntBASIC4.34□□□□□ -1.71
HOXD11P31277 MIR216B-201ENST00000390186 82 ntBASIC4.34□□□□□ -1.71
HOXD11P31277 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXD11P31277 RNA5SP49-201ENST00000516450 115 ntBASIC4.34□□□□□ -1.71
HOXD11P31277 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD11P31277 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXD11P31277 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD11P31277 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD11P31277 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.72
HOXD11P31277 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD11P31277 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD11P31277 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXD11P31277 SNORA74C-1-201ENST00000580726 201 ntBASIC4.33□□□□□ -1.72
HOXD11P31277 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD11P31277 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HOXD11P31277 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD11P31277 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD11P31277 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 RNU6-260P-201ENST00000384092 107 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 MIR1257-201ENST00000408490 117 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 RN7SL601P-201ENST00000471221 293 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 RNA5SP249-201ENST00000516127 99 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 RNU6-765P-201ENST00000516916 99 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD11P31277 5S_rRNA.15-201ENST00000611169 127 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
HOXD11P31277 MAPK10-373ENST00000641983 6772 ntBASIC4.32□□□□□ -1.72
HOXD11P31277 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD11P31277 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD11P31277 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXD11P31277 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXD11P31277 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD11P31277 MIR548C-201ENST00000384815 97 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 MIR630-201ENST00000384957 97 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 RNA5SP501-201ENST00000410990 112 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 RNA5SP344-201ENST00000411081 104 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 AL691482.1-201ENST00000453255 87 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 RNU6-980P-201ENST00000516925 103 ntBASIC4.31□□□□□ -1.72
HOXD11P31277 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD11P31277 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HOXD11P31277 RNU6-360P-201ENST00000390944 104 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 RNA5SP247-201ENST00000411181 105 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 RNU7-185P-201ENST00000459215 60 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 AC003982.1-202ENST00000469928 248 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 RNU6-656P-201ENST00000516785 107 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 MIR4672-201ENST00000583126 81 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 MIR8057-201ENST00000620957 69 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 MIR6516-201ENST00000630554 81 ntBASIC4.3□□□□□ -1.72
HOXD11P31277 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD11P31277 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD11P31277 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HOXD11P31277 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD11P31277 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HOXD11P31277 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
HOXD11P31277 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD11P31277 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD11P31277 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD11P31277 AC139713.2-215ENST00000641428 5037 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXD11P31277 SNORD9-201ENST00000362566 104 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 SNORD74.4-201ENST00000364129 80 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 MIR1261-201ENST00000408659 82 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 TRBV12-2-201ENST00000489763 344 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
HOXD11P31277 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD11P31277 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HOXD11P31277 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
HOXD11P31277 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD11P31277 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD11P31277 MIR591-201ENST00000385290 95 ntBASIC4.28□□□□□ -1.72
HOXD11P31277 CKS1BP6-201ENST00000424932 240 ntBASIC4.28□□□□□ -1.72
HOXD11P31277 RNU7-119P-201ENST00000459279 63 ntBASIC4.28□□□□□ -1.72
HOXD11P31277 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
HOXD11P31277 CYCSP40-201ENST00000575927 294 ntBASIC4.28□□□□□ -1.72
HOXD11P31277 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD11P31277 RNA5SP259-201ENST00000365541 109 ntBASIC4.27□□□□□ -1.73
HOXD11P31277 RNU6-203P-201ENST00000384038 104 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms