Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 UBBP3-201ENST00000445497 241 ntBASIC2.73□□□□□ -1.97
RARAP10276 RPL23AP63-201ENST00000498752 471 ntBASIC2.73□□□□□ -1.97
RARAP10276 RNU6-638P-201ENST00000516582 104 ntBASIC2.73□□□□□ -1.97
RARAP10276 RNA5SP437-201ENST00000517249 129 ntBASIC2.73□□□□□ -1.97
RARAP10276 MIR548Z-201ENST00000584743 97 ntBASIC2.73□□□□□ -1.97
RARAP10276 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RARAP10276 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RARAP10276 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RARAP10276 Y_RNA.164-201ENST00000363709 102 ntBASIC2.72□□□□□ -1.97
RARAP10276 Y_RNA.377-201ENST00000365644 108 ntBASIC2.72□□□□□ -1.97
RARAP10276 MIR520A-201ENST00000384862 85 ntBASIC2.72□□□□□ -1.97
RARAP10276 RNA5SP465-201ENST00000391195 109 ntBASIC2.72□□□□□ -1.97
RARAP10276 RNA5SP181-201ENST00000410246 98 ntBASIC2.72□□□□□ -1.97
RARAP10276 RNU6-1190P-201ENST00000410811 104 ntBASIC2.72□□□□□ -1.97
RARAP10276 RNA5SP445-201ENST00000515889 115 ntBASIC2.72□□□□□ -1.97
RARAP10276 DNAJC19P9-201ENST00000555084 351 ntBASIC2.72□□□□□ -1.97
RARAP10276 ELOCP29-201ENST00000588193 334 ntBASIC2.72□□□□□ -1.97
RARAP10276 MIR4791-201ENST00000607666 84 ntBASIC2.72□□□□□ -1.97
RARAP10276 AC021506.2-201ENST00000612354 169 ntBASIC2.72□□□□□ -1.97
RARAP10276 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.72□□□□□ -1.97
RARAP10276 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.72□□□□□ -1.97
RARAP10276 AC091304.10-201ENST00000641554 121 ntBASIC2.72□□□□□ -1.97
RARAP10276 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
RARAP10276 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
RARAP10276 Y_RNA.430-201ENST00000384081 110 ntBASIC2.71□□□□□ -1.98
RARAP10276 SNORA18-201ENST00000384416 132 ntBASIC2.71□□□□□ -1.98
RARAP10276 MIR526A1-201ENST00000384897 85 ntBASIC2.71□□□□□ -1.98
RARAP10276 SNORA48.1-201ENST00000390879 135 ntBASIC2.71□□□□□ -1.98
RARAP10276 SNORD28B-201ENST00000390993 75 ntBASIC2.71□□□□□ -1.98
RARAP10276 RNA5SP261-201ENST00000410536 106 ntBASIC2.71□□□□□ -1.98
RARAP10276 RNU7-73P-201ENST00000458743 63 ntBASIC2.71□□□□□ -1.98
RARAP10276 RNU7-34P-201ENST00000459394 64 ntBASIC2.71□□□□□ -1.98
RARAP10276 SNORD123-201ENST00000459473 70 ntBASIC2.71□□□□□ -1.98
RARAP10276 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
RARAP10276 RNU6-162P-201ENST00000516228 103 ntBASIC2.71□□□□□ -1.98
RARAP10276 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
RARAP10276 SUB1P4-201ENST00000566062 339 ntBASIC2.71□□□□□ -1.98
RARAP10276 MIR548AR-201ENST00000582191 57 ntBASIC2.71□□□□□ -1.98
RARAP10276 AL020996.3-201ENST00000606617 222 ntBASIC2.71□□□□□ -1.98
RARAP10276 MIR6717-201ENST00000622747 73 ntBASIC2.71□□□□□ -1.98
RARAP10276 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RARAP10276 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
RARAP10276 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RARAP10276 Y_RNA.219-201ENST00000364232 113 ntBASIC2.7□□□□□ -1.98
RARAP10276 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
RARAP10276 RNU6-1201P-201ENST00000384227 107 ntBASIC2.7□□□□□ -1.98
RARAP10276 MIR518A2-201ENST00000384966 87 ntBASIC2.7□□□□□ -1.98
RARAP10276 RNU6-913P-201ENST00000390913 95 ntBASIC2.7□□□□□ -1.98
RARAP10276 AC245517.4-201ENST00000448601 281 ntBASIC2.7□□□□□ -1.98
RARAP10276 RNU6-1018P-201ENST00000516577 106 ntBASIC2.7□□□□□ -1.98
RARAP10276 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
RARAP10276 AC022254.1-201ENST00000567857 235 ntBASIC2.7□□□□□ -1.98
RARAP10276 MIR4777-201ENST00000583710 86 ntBASIC2.7□□□□□ -1.98
RARAP10276 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
RARAP10276 AC243994.1-201ENST00000618627 109 ntBASIC2.7□□□□□ -1.98
RARAP10276 AL513423.1-201ENST00000621695 132 ntBASIC2.7□□□□□ -1.98
RARAP10276 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RARAP10276 SNORD45B-201ENST00000364617 72 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNU6-60P-201ENST00000364792 103 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNU6-296P-201ENST00000384608 107 ntBASIC2.69□□□□□ -1.98
RARAP10276 MIR660-201ENST00000385235 97 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNU2-7P-201ENST00000410794 178 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNA5SP508-201ENST00000411327 119 ntBASIC2.69□□□□□ -1.98
RARAP10276 MRPL35P3-201ENST00000421557 364 ntBASIC2.69□□□□□ -1.98
RARAP10276 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
RARAP10276 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
RARAP10276 Y_RNA.685-201ENST00000516532 108 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNU6-521P-201ENST00000516663 105 ntBASIC2.69□□□□□ -1.98
RARAP10276 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
RARAP10276 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RARAP10276 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RARAP10276 RNU6-112P-201ENST00000363599 104 ntBASIC2.68□□□□□ -1.98
RARAP10276 SNORA38-201ENST00000363946 132 ntBASIC2.68□□□□□ -1.98
RARAP10276 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
RARAP10276 AC099513.1-201ENST00000490423 301 ntBASIC2.68□□□□□ -1.98
RARAP10276 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
RARAP10276 MIR4709-201ENST00000577272 72 ntBASIC2.68□□□□□ -1.98
RARAP10276 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RARAP10276 RNU6-859P-201ENST00000362728 107 ntBASIC2.67□□□□□ -1.98
RARAP10276 Y_RNA.95-201ENST00000363079 95 ntBASIC2.67□□□□□ -1.98
RARAP10276 Y_RNA.226-201ENST00000364337 114 ntBASIC2.67□□□□□ -1.98
RARAP10276 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RARAP10276 SNORD78.1-201ENST00000390866 65 ntBASIC2.67□□□□□ -1.98
RARAP10276 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
RARAP10276 AL451046.2-201ENST00000403074 277 ntBASIC2.67□□□□□ -1.98
RARAP10276 BTF3P4-201ENST00000418852 495 ntBASIC2.67□□□□□ -1.98
RARAP10276 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
RARAP10276 MIR5092-201ENST00000583139 88 ntBASIC2.67□□□□□ -1.98
RARAP10276 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
RARAP10276 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
RARAP10276 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RARAP10276 RNU6-1313P-201ENST00000362622 102 ntBASIC2.66□□□□□ -1.98
RARAP10276 Y_RNA.96-201ENST00000363092 109 ntBASIC2.66□□□□□ -1.98
RARAP10276 SNORA32-201ENST00000384072 121 ntBASIC2.66□□□□□ -1.98
RARAP10276 snoU13.27-201ENST00000459278 104 ntBASIC2.66□□□□□ -1.98
RARAP10276 Y_RNA.659-201ENST00000515994 113 ntBASIC2.66□□□□□ -1.98
RARAP10276 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RARAP10276 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
RARAP10276 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.65□□□□□ -1.98
RARAP10276 SNORD56.5-201ENST00000364281 72 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms