Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SNORD115-10-201ENST00000365073 81 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-43-201ENST00000365503 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORD115-36-201ENST00000365629 82 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 MIR1289-2-201ENST00000408360 111 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 RNU7-45P-201ENST00000459460 63 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 SNORA31.10-201ENST00000516482 106 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 MIR3618-201ENST00000580330 88 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 MIR5194-201ENST00000582634 120 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 AC087741.2-201ENST00000619415 172 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 AC027279.3-201ENST00000625055 122 ntBASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ZC3H4Q9UPT8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 SNORA4.2-201ENST00000365313 147 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 RNU6-573P-201ENST00000383938 106 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 AL034345.1-201ENST00000407768 123 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 BX510359.4-201ENST00000423750 193 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 AC026421.1-201ENST00000519101 163 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 AC095038.3-201ENST00000634439 195 ntBASIC3.28□□□□□ -1.88
ZC3H4Q9UPT8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
ZC3H4Q9UPT8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-661P-201ENST00000362409 107 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 MIR516B2-201ENST00000385190 85 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 U8.16-201ENST00000391279 133 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-733P-201ENST00000410759 104 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNU7-113P-201ENST00000459273 62 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNU7-61P-201ENST00000515897 61 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNU7-12P-201ENST00000516030 62 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNA5SP458-201ENST00000516188 119 ntBASIC3.27□□□□□ -1.89
ZC3H4Q9UPT8 RNA5SP289-201ENST00000362332 137 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.10-201ENST00000362371 110 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-409P-201ENST00000384114 104 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 MIR29C-201ENST00000385231 88 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.601-201ENST00000410500 113 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 RNA5SP270-201ENST00000411361 118 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 HMGN2P3-201ENST00000433603 273 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 HMGN2P5-201ENST00000436882 273 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 RNA5SP57-201ENST00000459463 123 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 RN7SL633P-201ENST00000488974 297 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.773-201ENST00000607168 90 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 AC092881.1-201ENST00000638218 2733 ntBASIC3.26□□□□□ -1.89
ZC3H4Q9UPT8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 MIR26A1-201ENST00000362205 77 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-1099P-201ENST00000363533 107 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 RNU4-67P-201ENST00000364569 141 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 MIR597-201ENST00000384968 97 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 AC069257.2-201ENST00000441819 155 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-893P-201ENST00000458841 100 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 SNORA31.4-201ENST00000516049 129 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-795P-201ENST00000516323 103 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 MAPK10-266ENST00000641066 6555 ntBASIC3.25□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.171-201ENST00000363760 102 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RNU1-52P-201ENST00000384190 164 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-820P-201ENST00000384273 107 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 MIR512-1-201ENST00000384913 84 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RNU11-3P-201ENST00000391111 133 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 SNORA7.5-201ENST00000410672 110 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-592P-201ENST00000411333 103 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RN7SL499P-201ENST00000481141 276 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 RNA5SP168-201ENST00000516642 112 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 MIR1273D-201ENST00000577266 86 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 U4.3-201ENST00000621047 82 ntBASIC3.24□□□□□ -1.89
ZC3H4Q9UPT8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.360-201ENST00000365512 102 ntBASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 RNU7-67P-201ENST00000459003 62 ntBASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-162P-201ENST00000516228 103 ntBASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 MIR4694-201ENST00000578534 80 ntBASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZC3H4Q9UPT8 SNORD114-1-201ENST00000362705 72 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORD115-19-201ENST00000363098 82 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORD115-18-201ENST00000363293 82 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORD115-17-201ENST00000364612 82 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORA67.1-201ENST00000364749 141 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.299-201ENST00000364973 94 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORA1.2-201ENST00000365189 134 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-950P-201ENST00000384651 107 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 MIR605-201ENST00000385078 83 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 MIR577-201ENST00000385196 96 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 SNORD77B-201ENST00000391112 67 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 POLR2J4-204ENST00000418424 324 ntBASIC3.22□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-363P-201ENST00000362895 105 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-832P-201ENST00000363319 107 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 RNU6-833P-201ENST00000363486 107 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.290-201ENST00000364879 114 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 Y_RNA.370-201ENST00000365589 108 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 SNORA70.7-201ENST00000384159 133 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 MIR27B-201ENST00000385129 97 ntBASIC3.21□□□□□ -1.89
ZC3H4Q9UPT8 RNU4-69P-201ENST00000410677 143 ntBASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms