Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORD14A-201ENST00000606526 91 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 RNU6-86P-201ENST00000606534 107 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP432-201ENST00000362480 116 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RNU6-1229P-201ENST00000364295 107 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 SNORD114-6-201ENST00000364393 72 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RNU1-52P-201ENST00000384190 164 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 Y_RNA.565-201ENST00000384719 101 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RNU7-45P-201ENST00000459460 63 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 MIR3945-201ENST00000581853 98 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 SNORD3E-202ENST00000627253 216 ntBASIC3.09□□□□□ -1.91
CUEDC1Q9NWM3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
CUEDC1Q9NWM3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
CUEDC1Q9NWM3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CUEDC1Q9NWM3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-23P-201ENST00000363283 107 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 RNU7-2P-201ENST00000516096 62 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
CUEDC1Q9NWM3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 MIRLET7C-201ENST00000362160 84 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-862P-201ENST00000362804 105 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-457P-201ENST00000363999 107 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 Y_RNA.247-201ENST00000364500 92 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 Y_RNA.545-201ENST00000384652 105 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 MIR524-201ENST00000385242 87 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 SNORA26.6-201ENST00000391256 115 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 UBL5P1-201ENST00000507979 193 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC093729.1-201ENST00000513074 128 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 RNU7-181P-201ENST00000517234 74 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC103810.6-201ENST00000606708 136 ntBASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CUEDC1Q9NWM3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-1244P-201ENST00000363614 108 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 MIR519C-201ENST00000385053 87 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 AL606517.2-201ENST00000442855 241 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 STAG3L5P-204ENST00000443759 179 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 RNU7-34P-201ENST00000459394 64 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 RN7SL863P-201ENST00000462370 296 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 MIR6717-201ENST00000622747 73 ntBASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CUEDC1Q9NWM3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-524P-201ENST00000384270 107 ntBASIC3.05□□□□□ -1.92
CUEDC1Q9NWM3 RN7SKP192-201ENST00000411291 327 ntBASIC3.05□□□□□ -1.92
CUEDC1Q9NWM3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.05□□□□□ -1.92
CUEDC1Q9NWM3 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
CUEDC1Q9NWM3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-315P-201ENST00000362666 107 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-833P-201ENST00000363486 107 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-590P-201ENST00000365039 107 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 SNORA24-201ENST00000384096 131 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU11-3P-201ENST00000391111 133 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU7-73P-201ENST00000458743 63 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 RNU6-1116P-201ENST00000517269 99 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 U7.4-201ENST00000614961 63 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 MIR8054-201ENST00000620877 86 ntBASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.04□□□□□ -1.92
CUEDC1Q9NWM3 SNORD115-37-201ENST00000363768 82 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 SNORA3A-201ENST00000364113 130 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 Y_RNA.370-201ENST00000365589 108 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 SNORA32-201ENST00000384072 121 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 SNORA11.4-201ENST00000408823 129 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 RPS29P28-201ENST00000446439 141 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 MIR3162-201ENST00000581818 82 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 UBL5P2-201ENST00000583788 219 ntBASIC3.03□□□□□ -1.92
CUEDC1Q9NWM3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CUEDC1Q9NWM3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 RNU1-58P-201ENST00000362413 163 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 RNA5SP493-201ENST00000364115 91 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 SNORD115-27-201ENST00000364430 82 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 Y_RNA.567-201ENST00000384736 106 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 HMGN2P35-201ENST00000412164 270 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 RNU7-67P-201ENST00000459003 62 ntBASIC3.02□□□□□ -1.93
CUEDC1Q9NWM3 AC140658.3-201ENST00000567603 271 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms