Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-419P-201ENST00000517030 63 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 AP000942.3-201ENST00000603702 160 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 AL449363.1-201ENST00000617815 186 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 MIR7702-201ENST00000621931 59 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
RNF39Q9H2S5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 RNA5SP399-201ENST00000364003 117 ntBASIC4.33□□□□□ -1.72
RNF39Q9H2S5 MIR30B-201ENST00000384850 88 ntBASIC4.33□□□□□ -1.72
RNF39Q9H2S5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF39Q9H2S5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 RNU1-58P-201ENST00000362413 163 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 RNU6-810P-201ENST00000364001 107 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 Y_RNA.250-201ENST00000364542 110 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 MIR521-2-201ENST00000384818 87 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 AC093578.1-201ENST00000415219 368 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 BX510359.4-201ENST00000423750 193 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 ARF4P2-201ENST00000430209 526 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 MIR6082-201ENST00000613604 109 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 AL365361.1-201ENST00000566942 3481 ntBASIC4.32□□□□□ -1.72
RNF39Q9H2S5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF39Q9H2S5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 RNA5SP124-201ENST00000362739 110 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 RNU6-990P-201ENST00000364385 104 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 MIR520A-201ENST00000384862 85 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 MT-TN-201ENST00000387400 73 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 RN7SL323P-201ENST00000494712 295 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 AL121772.2-201ENST00000614331 297 ntBASIC4.31□□□□□ -1.72
RNF39Q9H2S5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RNF39Q9H2S5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF39Q9H2S5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF39Q9H2S5 Y_RNA.13-201ENST00000362403 112 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 RHEBP3-201ENST00000411920 351 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 HLA-N-201ENST00000437516 135 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 snoU13.27-201ENST00000459278 104 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 AC018659.1-201ENST00000551083 169 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 MIR4444-1-201ENST00000581696 74 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 MIR4444-2-201ENST00000584390 74 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 MIR548O2-201ENST00000616090 70 ntBASIC4.3□□□□□ -1.72
RNF39Q9H2S5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF39Q9H2S5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF39Q9H2S5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF39Q9H2S5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 AC073325.2-201ENST00000339545 159 ntBASIC4.29□□□□□ -1.72
RNF39Q9H2S5 RNU6-822P-201ENST00000362707 106 ntBASIC4.29□□□□□ -1.72
RNF39Q9H2S5 SNORA51-201ENST00000606420 132 ntBASIC4.29□□□□□ -1.72
RNF39Q9H2S5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF39Q9H2S5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF39Q9H2S5 SNORA63.1-201ENST00000362493 131 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 MIR18B-201ENST00000454574 71 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 SNORD42B-201ENST00000458893 67 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 RNU7-74P-201ENST00000459104 62 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 RNU6-322P-201ENST00000516010 103 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 RNA5SP143-201ENST00000516936 115 ntBASIC4.28□□□□□ -1.72
RNF39Q9H2S5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 Y_RNA.246-201ENST00000364495 108 ntBASIC4.27□□□□□ -1.73
RNF39Q9H2S5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 MIR2115-201ENST00000516657 100 ntBASIC4.27□□□□□ -1.73
RNF39Q9H2S5 RNA5SP437-201ENST00000517249 129 ntBASIC4.27□□□□□ -1.73
RNF39Q9H2S5 CYP4A43P-201ENST00000568156 121 ntBASIC4.27□□□□□ -1.73
RNF39Q9H2S5 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
RNF39Q9H2S5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF39Q9H2S5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RNF39Q9H2S5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF39Q9H2S5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF39Q9H2S5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RNF39Q9H2S5 SNORA73.2-201ENST00000364946 201 ntBASIC4.26□□□□□ -1.73
RNF39Q9H2S5 Y_RNA.325-201ENST00000365171 122 ntBASIC4.26□□□□□ -1.73
RNF39Q9H2S5 RNU6ATAC-201ENST00000408749 126 ntBASIC4.26□□□□□ -1.73
RNF39Q9H2S5 AC003685.2-201ENST00000422795 395 ntBASIC4.26□□□□□ -1.73
RNF39Q9H2S5 MIR6075-201ENST00000620782 95 ntBASIC4.26□□□□□ -1.73
RNF39Q9H2S5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF39Q9H2S5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms