Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 DNAJC19P9-201ENST00000555084 351 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.09□□□□□ -1.91
COL25A1Q9BXS0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
COL25A1Q9BXS0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 MIRLET7C-201ENST00000362160 84 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 Y_RNA.205-201ENST00000364128 113 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 RN7SKP223-201ENST00000410582 62 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 RNU6-519P-201ENST00000410590 108 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 AL606517.2-201ENST00000442855 241 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 SPINT5P-201ENST00000448174 155 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 RNU7-53P-201ENST00000516705 60 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 MIR4474-201ENST00000579189 78 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 uc_338.1-201ENST00000612113 180 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 SNORD3E-202ENST00000627253 216 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
COL25A1Q9BXS0 SNORA70.7-201ENST00000384159 133 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 CST2P1-201ENST00000425770 87 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 AC245047.3-201ENST00000429428 127 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 RN7SL20P-201ENST00000488827 297 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 RN7SL636P-201ENST00000497504 294 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 RNU6-958P-201ENST00000516995 106 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 AC027279.3-201ENST00000625055 122 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 MIR7153-201ENST00000637758 57 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 AC008163.1-202ENST00000636004 2889 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 GABRG2-229ENST00000641017 3628 ntBASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL25A1Q9BXS0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 RNU6-686P-201ENST00000364839 107 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 RNU6-480P-201ENST00000384332 107 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 AL031183.1-201ENST00000457667 207 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 FAM106DP-201ENST00000586416 501 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 AL020996.3-201ENST00000606617 222 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 MIR4791-201ENST00000607666 84 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 MIR5739-201ENST00000619803 80 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
COL25A1Q9BXS0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 SNORD114-1-201ENST00000362705 72 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 Y_RNA.168-201ENST00000363740 102 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 SNORD114-6-201ENST00000364393 72 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNU6-865P-201ENST00000364772 107 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 SNORA1.2-201ENST00000365189 134 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 SNORA24-201ENST00000384096 131 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 Y_RNA.448-201ENST00000384185 108 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNA5SP229-201ENST00000410809 99 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNU4-53P-201ENST00000410828 140 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNU6-634P-201ENST00000459134 106 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 RNU7-35P-201ENST00000517174 62 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 AC012676.2-201ENST00000619258 186 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 AC006111.3-201ENST00000622137 383 ntBASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL25A1Q9BXS0 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNA5SP289-201ENST00000362332 137 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 SNORA63.2-201ENST00000362603 126 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNA5SP325-201ENST00000363756 130 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNU6-342P-201ENST00000384521 104 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 SNORA2B-201ENST00000384583 137 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 Y_RNA.540-201ENST00000384638 111 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 MTND4LP19-201ENST00000403051 166 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNU6-380P-201ENST00000410207 107 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNU2-59P-201ENST00000410482 191 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNU7-67P-201ENST00000459003 62 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RNU6-448P-201ENST00000517052 107 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 AC007336.1-201ENST00000576365 3828 ntBASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.04□□□□□ -1.92
COL25A1Q9BXS0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 RNA5SP133-201ENST00000363368 119 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 Y_RNA.370-201ENST00000365589 108 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 MIR27B-201ENST00000385129 97 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 RNU6-913P-201ENST00000390913 95 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 SNORD4B-201ENST00000459083 72 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 snoU13.11-201ENST00000459219 104 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 RNU6-687P-201ENST00000516443 89 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 SNORA48.11-201ENST00000517015 89 ntBASIC3.03□□□□□ -1.92
COL25A1Q9BXS0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms