Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RNU6-508P-201ENST00000363231 103 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 RNU6-1082P-201ENST00000364574 107 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 SNORD72-201ENST00000390994 80 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 AC092991.1-201ENST00000477176 376 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 SNORA74.3-201ENST00000517108 154 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 Y_RNA.778-201ENST00000620203 90 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 uc_338.20-201ENST00000621563 178 ntBASIC2.31□□□□□ -2.04
ZNF428Q96B54 Y_RNA.357-201ENST00000365487 109 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RNU6-449P-201ENST00000383914 107 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RNU6-643P-201ENST00000384018 107 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RNU6-239P-201ENST00000390990 99 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 AC093850.1-201ENST00000454121 251 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RPL39P39-201ENST00000455840 151 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RNU7-197P-201ENST00000458836 62 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 FAM106DP-201ENST00000586416 501 ntBASIC2.3□□□□□ -2.04
ZNF428Q96B54 RNU6-888P-201ENST00000363010 101 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 Y_RNA.400-201ENST00000383963 111 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 RNU6-460P-201ENST00000391158 108 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 RNU6-257P-201ENST00000410238 98 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 RNU6-917P-201ENST00000516294 104 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 SNORA25.15-201ENST00000516487 89 ntBASIC2.29□□□□□ -2.04
ZNF428Q96B54 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ZNF428Q96B54 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZNF428Q96B54 Y_RNA.568-201ENST00000384742 113 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 RNU6-588P-201ENST00000410281 105 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 AL606753.1-201ENST00000427435 87 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.28□□□□□ -2.04
ZNF428Q96B54 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.28□□□□□ -2.04
ZNF428Q96B54 MIR4419B-201ENST00000577260 68 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 MIR4303-201ENST00000581299 66 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 AP000942.3-201ENST00000603702 160 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.28□□□□□ -2.04
ZNF428Q96B54 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.28□□□□□ -2.04
ZNF428Q96B54 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.28□□□□□ -2.04
ZNF428Q96B54 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF428Q96B54 Y_RNA.634-201ENST00000364811 113 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 Y_RNA.410-201ENST00000383992 113 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 Y_RNA.486-201ENST00000384398 107 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 Y_RNA.525-201ENST00000384570 113 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 Y_RNA.542-201ENST00000384641 111 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 MIR526A1-201ENST00000384897 85 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 AC107297.1-201ENST00000459991 176 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 MIR3664-201ENST00000579074 99 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 MIR3618-201ENST00000580330 88 ntBASIC2.27□□□□□ -2.05
ZNF428Q96B54 RNU6-978P-201ENST00000364371 103 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 Y_RNA.294-201ENST00000364916 102 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 SNORD48-201ENST00000364953 64 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 MIR613-201ENST00000385248 95 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 Y_RNA.586-201ENST00000391146 98 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 MIR548O-201ENST00000408583 114 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 RNA5SP364-201ENST00000516938 78 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF428Q96B54 AC134878.1-201ENST00000619901 243 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
ZNF428Q96B54 Y_RNA.488-201ENST00000384403 102 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 Y_RNA.497-201ENST00000384447 98 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 MIR518E-201ENST00000385252 88 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 RNU4-62P-201ENST00000410125 130 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.25□□□□□ -2.05
ZNF428Q96B54 AL512310.8-201ENST00000550183 120 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 MTND5P32-201ENST00000560711 1802 ntBASIC2.25□□□□□ -2.05
ZNF428Q96B54 MIR337-201ENST00000362281 93 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 Y_RNA.218-201ENST00000364218 104 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 SNORD113-1-201ENST00000365321 69 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ZNF428Q96B54 RNU2-40P-201ENST00000410833 196 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 MTND4LP9-201ENST00000427694 174 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 AC107027.2-201ENST00000512197 115 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 DNAJC19P2-201ENST00000593340 302 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF428Q96B54 MIR376A2-201ENST00000636782 80 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 AC132825.6-201ENST00000638861 357 ntBASIC2.24□□□□□ -2.05
ZNF428Q96B54 Y_RNA.251-201ENST00000364551 99 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 SNORA70.7-201ENST00000384159 133 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ZNF428Q96B54 TMSB4XP3-201ENST00000445144 114 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 RNU6-971P-201ENST00000516920 106 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 AC007751.1-201ENST00000529260 376 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 MIR3683-201ENST00000580847 82 ntBASIC2.23□□□□□ -2.05
ZNF428Q96B54 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
ZNF428Q96B54 Y_RNA.66-201ENST00000362862 102 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 SNORD115-28-201ENST00000363931 81 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 RNA5SP48-201ENST00000363969 126 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 Y_RNA.420-201ENST00000384043 110 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 SNORA1-201ENST00000384107 130 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 SNORD41-201ENST00000386967 70 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 SNORD123-201ENST00000459473 70 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 RNU6-1234P-201ENST00000516877 103 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 RNU6-789P-201ENST00000517105 102 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 RNU2-60P-201ENST00000517290 128 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 AL365222.1-201ENST00000614661 98 ntBASIC2.22□□□□□ -2.05
ZNF428Q96B54 SNORD115-34-201ENST00000362441 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-12-201ENST00000362583 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-29-201ENST00000362834 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-9-201ENST00000362912 82 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-21-201ENST00000362963 81 ntBASIC2.21□□□□□ -2.06
ZNF428Q96B54 SNORD115-14-201ENST00000363090 81 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms