Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
HPS1Q92902 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS1Q92902 AL355596.1-201ENST00000565399 3996 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 RNA5SP51-201ENST00000364750 119 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 Y_RNA.532-201ENST00000384590 113 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 CYCSP4-201ENST00000429682 331 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 AP003355.3-201ENST00000623465 114 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HPS1Q92902 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HPS1Q92902 AC245060.5-201ENST00000610778 3293 ntBASIC3.1□□□□□ -1.91
HPS1Q92902 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HPS1Q92902 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HPS1Q92902 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HPS1Q92902 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 MTND4LP19-201ENST00000403051 166 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS1Q92902 RNU7-85P-201ENST00000458851 63 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 SNORD123-201ENST00000459473 70 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 RNU2-27P-201ENST00000516185 142 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS1Q92902 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
HPS1Q92902 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
HPS1Q92902 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
HPS1Q92902 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HPS1Q92902 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.92
HPS1Q92902 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HPS1Q92902 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPS1Q92902 RNU5F-1-201ENST00000362507 117 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 RNU6-525P-201ENST00000363685 104 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 RNA5SP139-201ENST00000364340 117 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 RNU6-1067P-201ENST00000384752 107 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 AL161756.2-201ENST00000604597 246 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 Z97988.1-201ENST00000637697 135 ntBASIC3.08□□□□□ -1.92
HPS1Q92902 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPS1Q92902 RNU6-1019P-201ENST00000364424 107 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 RNU6-471P-201ENST00000383944 106 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 SNORA9-201ENST00000384215 133 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 RNU6-800P-201ENST00000384473 103 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HPS1Q92902 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 AC093850.1-201ENST00000454121 251 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 RNU6-1108P-201ENST00000516308 104 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 SNORA70.19-201ENST00000516717 90 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 RNU6-579P-201ENST00000516879 102 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 SNORA70.24-201ENST00000517233 118 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 AC026333.2-201ENST00000542164 106 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 AC022513.1-201ENST00000624512 117 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HPS1Q92902 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HPS1Q92902 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPS1Q92902 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HPS1Q92902 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPS1Q92902 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
HPS1Q92902 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.06□□□□□ -1.92
HPS1Q92902 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.06□□□□□ -1.92
HPS1Q92902 RNA5SP50-201ENST00000363731 107 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 RNU6-950P-201ENST00000384651 107 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 RNU6-587P-201ENST00000391282 106 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 AC003685.2-201ENST00000422795 395 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 HSPE1P9-201ENST00000440046 311 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 Y_RNA.648-201ENST00000459455 110 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 RPS29P11-201ENST00000496507 171 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 SNORD14A-201ENST00000606526 91 ntBASIC3.06□□□□□ -1.92
HPS1Q92902 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS1Q92902 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HPS1Q92902 RNU6-23P-201ENST00000363283 107 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 RNU6-540P-201ENST00000384622 101 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 MIR520H-201ENST00000385126 88 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 AP000753.3-201ENST00000604083 169 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 U6.111-201ENST00000636093 83 ntBASIC3.05□□□□□ -1.92
HPS1Q92902 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.05□□□□□ -1.92
HPS1Q92902 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HPS1Q92902 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HPS1Q92902 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HPS1Q92902 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HPS1Q92902 Y_RNA.264-201ENST00000364665 102 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 MIR491-201ENST00000384877 84 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS1Q92902 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 MIR4484-201ENST00000582855 83 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 AC069114.2-201ENST00000604699 304 ntBASIC3.04□□□□□ -1.92
HPS1Q92902 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.04□□□□□ -1.92
HPS1Q92902 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
HPS1Q92902 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HPS1Q92902 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HPS1Q92902 SNORD9-201ENST00000362566 104 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 RNU6-296P-201ENST00000384608 107 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 MIR635-201ENST00000384830 98 ntBASIC3.03□□□□□ -1.92
HPS1Q92902 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms