Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 RPS29P12-201ENST00000460178 152 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 RNU7-153P-201ENST00000516455 62 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 SNORA48.11-201ENST00000517015 89 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 MIR3134-201ENST00000579433 74 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 ICE2P2-201ENST00000483823 2787 ntBASIC3.55□□□□□ -1.84
NKX2-3Q8TAU0 AC062016.1-201ENST00000355719 319 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 MIRLET7A1-201ENST00000362295 80 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 RNU1-23P-201ENST00000363361 144 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 SNORA24-201ENST00000384096 131 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 RNU6-1307P-201ENST00000391012 103 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 AL450471.1-201ENST00000447509 127 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 AL356280.1-201ENST00000603614 379 ntBASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-3Q8TAU0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 MIRLET7C-201ENST00000362160 84 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 SNORD38.2-201ENST00000384470 69 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 RNU6-519P-201ENST00000410590 108 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 AC245047.3-201ENST00000429428 127 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 RNU7-73P-201ENST00000458743 63 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 MIR3199-1-201ENST00000582434 88 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 MIR7843-201ENST00000622274 79 ntBASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-3Q8TAU0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 AC093831.2-201ENST00000624393 3427 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-686P-201ENST00000364839 107 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 SNORA70B-201ENST00000384210 135 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 RNU4-37P-201ENST00000410214 84 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 AC087499.7-201ENST00000441958 109 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 SPINT5P-201ENST00000448174 155 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 RPS29P29-201ENST00000456396 171 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 SCARNA18B-201ENST00000458806 135 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-958P-201ENST00000516995 106 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 RNU7-35P-201ENST00000517174 62 ntBASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-3Q8TAU0 AC092435.3-201ENST00000565538 3654 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.168-201ENST00000363740 102 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-865P-201ENST00000364772 107 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.370-201ENST00000365589 108 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 SNORA46-201ENST00000384762 135 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 MIR181B2-201ENST00000385004 89 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-447P-201ENST00000410293 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1118P-201ENST00000410382 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1076P-201ENST00000410397 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-355P-201ENST00000410427 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-791P-201ENST00000410467 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-705P-201ENST00000410601 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1100P-201ENST00000410691 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-860P-201ENST00000410860 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1217P-201ENST00000411276 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-785P-201ENST00000411324 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU7-67P-201ENST00000459003 62 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RN7SL75P-201ENST00000461926 281 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 AC079600.2-201ENST00000550076 130 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 AL020996.3-201ENST00000606617 222 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 SNORA28-201ENST00000606769 126 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 U6.90-201ENST00000614007 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 U6.70-201ENST00000620287 104 ntBASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-851P-201ENST00000384565 107 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 MIR504-201ENST00000385065 83 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 FO393413.1-201ENST00000402892 195 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 RNU2-59P-201ENST00000410482 191 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1015P-201ENST00000517121 99 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 RNU6-1116P-201ENST00000517269 99 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 MIR4524B-201ENST00000581569 115 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 MIR3616-201ENST00000584070 92 ntBASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-3Q8TAU0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 Y_RNA.386-201ENST00000383913 105 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 AC092185.1-201ENST00000491371 97 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 RN7SKP132-201ENST00000516001 208 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 RNA5SP380-201ENST00000517190 98 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 FAM106DP-201ENST00000586416 501 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 AC020891.4-201ENST00000605745 93 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 AC012676.2-201ENST00000619258 186 ntBASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-3Q8TAU0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms