Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 ICE2P2-201ENST00000483823 2787 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.35-201ENST00000362601 101 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.346-201ENST00000365385 112 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-1189P-201ENST00000383958 107 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 SNORD116-21-201ENST00000384507 92 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 MIR518A2-201ENST00000384966 87 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 MIR1263-201ENST00000408324 86 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 AC063976.4-201ENST00000421971 163 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-113P-201ENST00000516653 101 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 SNORD36C-201ENST00000516733 66 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 AL121890.5-201ENST00000620848 304 ntBASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.18□□□□□ -2.06
SHCBP1Q8NEM2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SNORA63D-201ENST00000364359 132 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SNORA4.2-201ENST00000365313 147 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SNORA2.2-201ENST00000365473 135 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.366-201ENST00000365540 102 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SNORA22-201ENST00000383907 134 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 CALM2P4-201ENST00000430810 426 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 HMGN2P32-201ENST00000444648 269 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SNORA28-201ENST00000606769 126 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 AC015726.2-201ENST00000620112 122 ntBASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHCBP1Q8NEM2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-755P-201ENST00000364400 103 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 RNU6-163P-201ENST00000384396 106 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 MIR548A1-201ENST00000385041 97 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 AC069257.2-201ENST00000441819 155 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.649-201ENST00000459077 103 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 CYCTP-201ENST00000504253 315 ntBASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHCBP1Q8NEM2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHCBP1Q8NEM2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP465-201ENST00000391195 109 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-240P-201ENST00000516098 97 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 AP003484.1-201ENST00000530974 250 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 MIR4255-201ENST00000579351 72 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 AL137067.1-201ENST00000615933 120 ntBASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.15□□□□□ -2.07
SHCBP1Q8NEM2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 SNORA17.3-201ENST00000391159 129 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 U8.16-201ENST00000391279 133 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 RN7SKP200-201ENST00000410564 320 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 RPS26P48-201ENST00000491713 339 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 AC027279.3-201ENST00000625055 122 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 AL442644.1-201ENST00000454390 3105 ntBASIC2.14□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-424P-201ENST00000384367 105 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-880P-201ENST00000384526 107 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 SNORA48.1-201ENST00000390879 135 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 MIR4781-201ENST00000585250 76 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 AC084768.2-201ENST00000622736 221 ntBASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SHCBP1Q8NEM2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-349P-201ENST00000362402 107 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 SNORD38C-201ENST00000384381 69 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 AL034345.1-201ENST00000407768 123 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP136-201ENST00000410906 107 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP501-201ENST00000410990 112 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 AC087499.4-201ENST00000448505 178 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP168-201ENST00000516642 112 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-250P-201ENST00000516958 103 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 snoU13.31-201ENST00000607291 104 ntBASIC2.12□□□□□ -2.07
SHCBP1Q8NEM2 MIR378A-201ENST00000362177 66 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 Y_RNA.226-201ENST00000364337 114 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 SNORA18.7-201ENST00000516910 131 ntBASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SHCBP1Q8NEM2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.1□□□□□ -2.07
SHCBP1Q8NEM2 RNU6-112P-201ENST00000363599 104 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms