Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 S100A11P1-201ENST00000477525 312 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 SCARNA17.1-201ENST00000516211 143 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 SCARNA17.2-201ENST00000516334 143 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 SNORA48.11-201ENST00000517015 89 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 MIR3657-201ENST00000584818 117 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 AC242498.1-201ENST00000604134 111 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 SCARNA17.4-201ENST00000614296 143 ntBASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRDL2Q6WN34 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 MIR449A-201ENST00000362113 91 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 RNU6-53P-201ENST00000365367 106 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 RNU1-44P-201ENST00000384453 163 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 CYCSP4-201ENST00000429682 331 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 CKS1BP2-201ENST00000497342 240 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 AC092435.4-201ENST00000623012 4159 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 AC131280.1-202ENST00000624067 4211 ntBASIC4.16□□□□□ -1.74
CHRDL2Q6WN34 SNORA5B-201ENST00000363786 132 ntBASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 SNORA25.16-201ENST00000516741 121 ntBASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 SNORA40.16-201ENST00000517238 121 ntBASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 AL035425.3-201ENST00000564206 4996 ntBASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRDL2Q6WN34 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 RNU4ATAC16P-201ENST00000408512 126 ntBASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 CYP2C59P-201ENST00000457790 269 ntBASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 S100A11P2-201ENST00000467589 312 ntBASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 MIR3935-201ENST00000583472 104 ntBASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 AC138207.3-201ENST00000585289 166 ntBASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRDL2Q6WN34 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 MIR30D-201ENST00000362283 70 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 RNU6-495P-201ENST00000362995 107 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 MIR921-201ENST00000401133 56 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 SNORA3C-201ENST00000408792 125 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 MIR1302-7-201ENST00000408841 72 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 NAMPTP3-201ENST00000569273 224 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 RNU7-10P-201ENST00000607194 63 ntBASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRDL2Q6WN34 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 RNU6-1072P-201ENST00000384703 107 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 RNU6-1031P-201ENST00000384773 107 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 RNU6-443P-201ENST00000384780 107 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 MIR548H5-201ENST00000580314 60 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 MIR7106-201ENST00000612419 65 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 MIR4251-201ENST00000635819 61 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 MAPK10-303ENST00000641324 3959 ntBASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRDL2Q6WN34 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 SNORD9-201ENST00000362566 104 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 RNU1-105P-201ENST00000363470 161 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 RNA5SP493-201ENST00000364115 91 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 MIR7-2-201ENST00000384970 110 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 MIR218-1-201ENST00000384999 110 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 SNORA48.1-201ENST00000390879 135 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 SNORD116.2-201ENST00000391251 93 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 Y_RNA.588-201ENST00000391254 102 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 AL359511.1-201ENST00000402970 211 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 MIR1261-201ENST00000408659 82 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 RNA5SP341-201ENST00000516261 117 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 SNORA70.19-201ENST00000516717 90 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 AL161431.1-201ENST00000618966 4205 ntBASIC4.11□□□□□ -1.75
CHRDL2Q6WN34 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms