Protein–RNA interactions for Protein: Q1ZZU3

SWI5, DNA repair protein SWI5 homolog, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5Q1ZZU3 POLR2J4-204ENST00000418424 324 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 RNU7-43P-201ENST00000516554 64 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 MIR5009-201ENST00000578736 100 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 MIR4287-201ENST00000579398 78 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 RPL12P50-201ENST00000603116 116 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 MALAT1.1-201ENST00000618249 95 ntBASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.66□□□□□ -1.98
SWI5Q1ZZU3 RNY1P10-201ENST00000363268 113 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 SNORA54-201ENST00000384281 123 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 SNORA44-201ENST00000384584 132 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 AL023284.1-201ENST00000403956 276 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 RPL39P25-201ENST00000449384 154 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 RNU7-73P-201ENST00000458743 63 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 AC234781.5-201ENST00000508429 271 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 RNU6-917P-201ENST00000516294 104 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 AC068339.1-201ENST00000526965 141 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.65□□□□□ -1.99
SWI5Q1ZZU3 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.299-201ENST00000364973 94 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 MIR520C-201ENST00000385005 87 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 RNU6-913P-201ENST00000390913 95 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 RPS23P4-201ENST00000487908 423 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 AC026421.1-201ENST00000519101 163 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 EIF4BP1-201ENST00000554881 351 ntBASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SWI5Q1ZZU3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 AC005336.3-201ENST00000623833 2679 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1134P-201ENST00000365156 101 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 MIR513A1-201ENST00000385138 129 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 RNA5SP225-201ENST00000410874 135 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 RNU6-158P-201ENST00000517104 100 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 AC141557.1-201ENST00000540982 400 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 MIR4764-201ENST00000580680 88 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 AL020996.3-201ENST00000606617 222 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 AL590808.1-201ENST00000618696 141 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 MIR6717-201ENST00000622747 73 ntBASIC2.63□□□□□ -1.99
SWI5Q1ZZU3 MIR22-201ENST00000362190 85 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 AL451046.2-201ENST00000403074 277 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 COTL1P1-201ENST00000422309 375 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 snoU13.16-201ENST00000459350 104 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 RNA5SP33-201ENST00000516687 98 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 AC008133.2-201ENST00000624540 351 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 MIR2052-201ENST00000636055 55 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 AL162726.3-218ENST00000636401 95 ntBASIC2.62□□□□□ -1.99
SWI5Q1ZZU3 RNU6-228P-201ENST00000362700 106 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 SNORA6-201ENST00000384033 151 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 RNU6-439P-201ENST00000384188 106 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 RNU6-816P-201ENST00000390914 107 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1268P-201ENST00000391214 107 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1239P-201ENST00000391310 107 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 HMGN1P33-201ENST00000432945 451 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 JTBP1-201ENST00000441314 247 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 AC113410.1-201ENST00000505029 247 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 RNU6-904P-201ENST00000516206 101 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 AC095038.3-201ENST00000634439 195 ntBASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
SWI5Q1ZZU3 SNORA80A-201ENST00000363922 136 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 SNORA1.1-201ENST00000364671 133 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1124P-201ENST00000384169 107 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 MIR194-1-201ENST00000384892 85 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 SNORD77B-201ENST00000391112 67 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 SNORA26.6-201ENST00000391256 115 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 RNA5SP274-201ENST00000410484 108 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 RNU4-69P-201ENST00000410677 143 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 AC006386.2-201ENST00000624491 75 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 AC012005.1-201ENST00000624575 75 ntBASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SWI5Q1ZZU3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 RNU6-972P-201ENST00000391208 107 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 MIR1912-201ENST00000410389 80 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 AC011753.1-201ENST00000451001 220 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 RNU6-65P-201ENST00000516332 98 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 AL773524.1-201ENST00000614065 229 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 MIR6841-201ENST00000637129 72 ntBASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SWI5Q1ZZU3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
SWI5Q1ZZU3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
SWI5Q1ZZU3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SWI5Q1ZZU3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SWI5Q1ZZU3 RNU6-813P-201ENST00000384691 107 ntBASIC2.58□□□□□ -2
SWI5Q1ZZU3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms