Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 SNORA38-201ENST00000363946 132 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 RNY1P13-201ENST00000365030 105 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 AL034345.1-201ENST00000407768 123 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 Y_RNA.596-201ENST00000410462 109 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 AC003685.2-201ENST00000422795 395 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 RPL23AP6-201ENST00000446637 472 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 SNRPGP12-201ENST00000449481 213 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 AC005908.1-201ENST00000468701 347 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 RPS26P15-201ENST00000488067 348 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 RPS29P11-201ENST00000496507 171 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 AC023141.11-201ENST00000508864 202 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 uc_338.32-201ENST00000615087 172 ntBASIC3.14□□□□□ -1.91
FOXC1Q12948 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXC1Q12948 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXC1Q12948 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXC1Q12948 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXC1Q12948 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXC1Q12948 RNU6-499P-201ENST00000365615 107 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 SNORD77.2-201ENST00000391045 68 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 AL138878.1-201ENST00000405131 347 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXC1Q12948 RNU6-303P-201ENST00000517091 106 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXC1Q12948 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 MIR7843-201ENST00000622274 79 ntBASIC3.13□□□□□ -1.91
FOXC1Q12948 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXC1Q12948 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXC1Q12948 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXC1Q12948 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXC1Q12948 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXC1Q12948 RNU6-1019P-201ENST00000364424 107 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 SNORA71.1-201ENST00000364523 117 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 Y_RNA.264-201ENST00000364665 102 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 CD24P4-201ENST00000382840 243 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 RNU6-811P-201ENST00000384069 107 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 SNORA11.4-201ENST00000408823 129 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 SNORA18.5-201ENST00000516616 101 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
FOXC1Q12948 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXC1Q12948 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXC1Q12948 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXC1Q12948 MAPK10-373ENST00000641983 6772 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXC1Q12948 RNY1P2-201ENST00000364820 117 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 SNORD115-31-201ENST00000365318 82 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FOXC1Q12948 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FOXC1Q12948 RNU6-141P-201ENST00000410499 105 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 MIR4644-201ENST00000579929 84 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 AP000753.3-201ENST00000604083 169 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.11□□□□□ -1.91
FOXC1Q12948 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXC1Q12948 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
FOXC1Q12948 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXC1Q12948 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXC1Q12948 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXC1Q12948 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXC1Q12948 RNU6-1241P-201ENST00000384536 107 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 MIR526A1-201ENST00000384897 85 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
FOXC1Q12948 RNU6-663P-201ENST00000391105 106 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 HMGN2P7-201ENST00000456186 273 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXC1Q12948 MIR4769-201ENST00000584126 77 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 AC005520.4-201ENST00000604337 90 ntBASIC3.1□□□□□ -1.91
FOXC1Q12948 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXC1Q12948 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXC1Q12948 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXC1Q12948 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXC1Q12948 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 MIR9-2-201ENST00000384838 87 ntBASIC3.09□□□□□ -1.91
FOXC1Q12948 RNU7-156P-201ENST00000517214 74 ntBASIC3.09□□□□□ -1.91
FOXC1Q12948 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
FOXC1Q12948 MIR4524B-201ENST00000581569 115 ntBASIC3.09□□□□□ -1.91
FOXC1Q12948 AC067747.1-201ENST00000608026 250 ntBASIC3.09□□□□□ -1.91
FOXC1Q12948 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXC1Q12948 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXC1Q12948 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
FOXC1Q12948 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
FOXC1Q12948 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXC1Q12948 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXC1Q12948 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
FOXC1Q12948 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FOXC1Q12948 RNA5SP295-201ENST00000362655 121 ntBASIC3.08□□□□□ -1.92
FOXC1Q12948 RNU6-850P-201ENST00000516934 103 ntBASIC3.08□□□□□ -1.92
FOXC1Q12948 AC090897.1-201ENST00000580909 226 ntBASIC3.08□□□□□ -1.92
FOXC1Q12948 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXC1Q12948 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXC1Q12948 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXC1Q12948 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms