Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC022217.4-201ENST00000604389 163 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 AC022709.1-201ENST00000615967 87 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 MIR6079-201ENST00000635807 62 ntBASIC1.79□□□□□ -2.12
DDR1Q08345 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
DDR1Q08345 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
DDR1Q08345 RNU1-93P-201ENST00000364704 169 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 MIR539-201ENST00000365690 78 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 RNU6-376P-201ENST00000384731 106 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 RNU6-1096P-201ENST00000517089 102 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 AL358944.1-201ENST00000528537 144 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 AP001328.1-201ENST00000528550 176 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 AL929325.1-201ENST00000603096 117 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 AL049861.1-201ENST00000603130 150 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 TUG1_4.1-201ENST00000619464 181 ntBASIC1.78□□□□□ -2.12
DDR1Q08345 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
DDR1Q08345 U8.1-201ENST00000362843 134 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 RNU6-484P-201ENST00000384016 107 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 RNU6-296P-201ENST00000384608 107 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
DDR1Q08345 RNU6-437P-201ENST00000459408 95 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.77□□□□□ -2.13
DDR1Q08345 AL021707.8-201ENST00000609428 183 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 MIR6734-201ENST00000621166 68 ntBASIC1.77□□□□□ -2.13
DDR1Q08345 Y_RNA.91-201ENST00000363042 107 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 RNU6-978P-201ENST00000364371 103 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 SNORA75.5-201ENST00000391291 81 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 RNU4-43P-201ENST00000410628 137 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 AC004223.1-201ENST00000479840 271 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 MIR6078-201ENST00000611069 100 ntBASIC1.76□□□□□ -2.13
DDR1Q08345 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
DDR1Q08345 SNORA40.5-201ENST00000391061 128 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 RNA5SP323-201ENST00000391094 133 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 RNY4P18-201ENST00000391107 89 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 Y_RNA.630-201ENST00000411370 108 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 RNU6-772P-201ENST00000516042 105 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 MIR3646-201ENST00000578301 84 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 U7.2-201ENST00000607576 63 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 AP001340.1-201ENST00000624405 217 ntBASIC1.75□□□□□ -2.13
DDR1Q08345 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.74□□□□□ -2.13
DDR1Q08345 Y_RNA.203-201ENST00000364106 102 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 SNORA25.7-201ENST00000364375 127 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 SNORA12.1-201ENST00000390873 148 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 RNU6-1064P-201ENST00000410626 104 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 MLLT10P1-201ENST00000418346 262 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.74□□□□□ -2.13
DDR1Q08345 PDCD5P2-201ENST00000507570 312 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 SNORD33.1-201ENST00000516213 88 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 RNU2-60P-201ENST00000517290 128 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 MTND5P34-201ENST00000568888 325 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 MIR378D2-201ENST00000580636 98 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 MTND5P32-201ENST00000560711 1802 ntBASIC1.74□□□□□ -2.13
DDR1Q08345 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.74□□□□□ -2.13
DDR1Q08345 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
DDR1Q08345 SNORA1B-201ENST00000362535 133 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RNU6-1056P-201ENST00000383996 107 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 Y_RNA.432-201ENST00000384087 111 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RNU6-476P-201ENST00000384726 107 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 MIR562-201ENST00000384894 95 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
DDR1Q08345 RNA5SP109-201ENST00000391010 116 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 Y_RNA.584-201ENST00000391090 114 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RNU6-1291P-201ENST00000516591 104 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RNU6-197P-201ENST00000516680 100 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RPL23AP91-201ENST00000569211 455 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 MIR3660-201ENST00000584845 100 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 MIR6767-201ENST00000637302 66 ntBASIC1.73□□□□□ -2.13
DDR1Q08345 RNU6-1298P-201ENST00000362456 101 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 SNORD114-27-201ENST00000363766 70 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 Y_RNA.354-201ENST00000365448 111 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 RNU6-597P-201ENST00000365620 102 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 RNU6-950P-201ENST00000384651 107 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 Y_RNA.563-201ENST00000384707 108 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 MIR520E-201ENST00000384867 87 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 RNU5E-3P-201ENST00000515913 68 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 RNU6-970P-201ENST00000516312 107 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 AC108081.1-201ENST00000604358 221 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.72□□□□□ -2.13
DDR1Q08345 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
DDR1Q08345 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
DDR1Q08345 Y_RNA.280-201ENST00000364765 112 ntBASIC1.71□□□□□ -2.14
DDR1Q08345 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
DDR1Q08345 RNY3P5-201ENST00000384127 102 ntBASIC1.71□□□□□ -2.14
DDR1Q08345 RNU6-1144P-201ENST00000384247 104 ntBASIC1.71□□□□□ -2.14
DDR1Q08345 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
DDR1Q08345 HSPE1P9-201ENST00000440046 311 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms