Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 SNORD3E-202ENST00000627253 216 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-457P-201ENST00000363999 107 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-1292P-201ENST00000383856 107 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 SNORD38C-201ENST00000384381 69 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 MIR452-201ENST00000385020 85 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 MIR624-201ENST00000385217 97 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 AL627390.1-201ENST00000396055 340 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU2-51P-201ENST00000410708 197 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNA5SP127-201ENST00000411051 133 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 BTF3P4-201ENST00000418852 495 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 AC015922.2-201ENST00000435593 184 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 AC093850.1-201ENST00000454121 251 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-830P-201ENST00000516353 107 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 MIR3129-201ENST00000581095 76 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 MIR4713-201ENST00000582691 75 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
E2F1Q01094 RNU6-44P-201ENST00000384045 107 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 Y_RNA.497-201ENST00000384447 98 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 RNU6-1168P-201ENST00000390831 104 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
E2F1Q01094 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 RNU6-1234P-201ENST00000516877 103 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 MIR4778-201ENST00000577635 80 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 AC015726.2-201ENST00000620112 122 ntBASIC1.76□□□□□ -2.13
E2F1Q01094 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
E2F1Q01094 RNY1P10-201ENST00000363268 113 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 RNU6-414P-201ENST00000363705 104 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 SNORD115-28-201ENST00000363931 81 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 RNU6-215P-201ENST00000365169 102 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 SNORD77.3-201ENST00000391113 65 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 MIR1287-201ENST00000408492 90 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AC004965.1-201ENST00000413033 213 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AF228730.3-201ENST00000436691 102 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.75□□□□□ -2.13
E2F1Q01094 SNORA18.4-201ENST00000516440 124 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AC131055.1-201ENST00000584626 316 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AP001485.1-201ENST00000604799 199 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AC134878.1-201ENST00000619901 243 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
E2F1Q01094 Y_RNA.420-201ENST00000384043 110 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 Y_RNA.584-201ENST00000391090 114 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 RNU6-460P-201ENST00000391158 108 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 RNU4-57P-201ENST00000515980 135 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 RNU6-971P-201ENST00000516920 106 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 AC010332.2-201ENST00000613083 1904 ntBASIC1.74□□□□□ -2.13
E2F1Q01094 RNU6-1298P-201ENST00000362456 101 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 Y_RNA.37-201ENST00000362606 108 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 MIR526A1-201ENST00000384897 85 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 RNU6-321P-201ENST00000410912 106 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 RNU6-938P-201ENST00000411285 103 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 AP1B1P2-201ENST00000416196 106 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 MTND4LP9-201ENST00000427694 174 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 RNU6-479P-201ENST00000516348 105 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.73□□□□□ -2.13
E2F1Q01094 AP001340.1-201ENST00000624405 217 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 MIR376A2-201ENST00000636782 80 ntBASIC1.73□□□□□ -2.13
E2F1Q01094 Y_RNA.52-201ENST00000362760 96 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 Y_RNA.410-201ENST00000383992 113 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 RNU6-1117P-201ENST00000384525 104 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 MIR516B2-201ENST00000385190 85 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 RNU6-1154P-201ENST00000391001 104 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 MIR5197-201ENST00000583721 112 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 AL359821.1-201ENST00000605519 182 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
E2F1Q01094 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.72□□□□□ -2.13
E2F1Q01094 RNU6-429P-201ENST00000384582 108 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 MIR136-201ENST00000385207 82 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
E2F1Q01094 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 AC087499.4-201ENST00000448505 178 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 SNORD36C-201ENST00000516733 66 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 SUMO2P16-201ENST00000519475 264 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
E2F1Q01094 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
E2F1Q01094 Y_RNA.71-201ENST00000362892 104 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 Y_RNA.120-201ENST00000363304 110 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 RNU6-153P-201ENST00000364422 104 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 RNA5SP205-201ENST00000364653 136 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 RNU6-1189P-201ENST00000383958 107 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 SNORA40-201ENST00000388090 126 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
E2F1Q01094 RNU2-60P-201ENST00000517290 128 ntBASIC1.7□□□□□ -2.14
E2F1Q01094 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms