Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MIR518F-201ENST00000384973 87 ntBASIC1.35□□□□□ -2.19
CLK1P49759 RNU4-61P-201ENST00000411243 107 ntBASIC1.35□□□□□ -2.19
CLK1P49759 AC108210.2-201ENST00000503681 201 ntBASIC1.35□□□□□ -2.19
CLK1P49759 Y_RNA.714-201ENST00000517065 90 ntBASIC1.35□□□□□ -2.19
CLK1P49759 RNU6-365P-201ENST00000517113 106 ntBASIC1.35□□□□□ -2.19
CLK1P49759 MIR3646-201ENST00000578301 84 ntBASIC1.35□□□□□ -2.19
CLK1P49759 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
CLK1P49759 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
CLK1P49759 Y_RNA.251-201ENST00000364551 99 ntBASIC1.34□□□□□ -2.19
CLK1P49759 Y_RNA.336-201ENST00000365307 109 ntBASIC1.34□□□□□ -2.19
CLK1P49759 SNORD50.2-201ENST00000365465 70 ntBASIC1.34□□□□□ -2.19
CLK1P49759 SNORA1-201ENST00000384107 130 ntBASIC1.34□□□□□ -2.19
CLK1P49759 Y_RNA.521-201ENST00000384560 114 ntBASIC1.34□□□□□ -2.19
CLK1P49759 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CLK1P49759 SNORA26-201ENST00000391286 122 ntBASIC1.34□□□□□ -2.19
CLK1P49759 SNORA75.5-201ENST00000391291 81 ntBASIC1.34□□□□□ -2.19
CLK1P49759 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CLK1P49759 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.34□□□□□ -2.19
CLK1P49759 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.34□□□□□ -2.19
CLK1P49759 AC104984.5-201ENST00000586878 94 ntBASIC1.34□□□□□ -2.19
CLK1P49759 AL365205.2-201ENST00000594586 68 ntBASIC1.34□□□□□ -2.19
CLK1P49759 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
CLK1P49759 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLK1P49759 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLK1P49759 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CLK1P49759 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-833P-201ENST00000363486 107 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-442P-201ENST00000383968 104 ntBASIC1.33□□□□□ -2.2
CLK1P49759 Y_RNA.488-201ENST00000384403 102 ntBASIC1.33□□□□□ -2.2
CLK1P49759 Y_RNA.568-201ENST00000384742 113 ntBASIC1.33□□□□□ -2.2
CLK1P49759 MIR660-201ENST00000385235 97 ntBASIC1.33□□□□□ -2.2
CLK1P49759 MIR613-201ENST00000385248 95 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-588P-201ENST00000410281 105 ntBASIC1.33□□□□□ -2.2
CLK1P49759 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
CLK1P49759 HMGN2P32-201ENST00000444648 269 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNA5SP272-201ENST00000516095 111 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-426P-201ENST00000516464 97 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-406P-201ENST00000516470 107 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU7-25P-201ENST00000516544 62 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-504P-201ENST00000516568 104 ntBASIC1.33□□□□□ -2.2
CLK1P49759 RNU6-1270P-201ENST00000517128 108 ntBASIC1.33□□□□□ -2.2
CLK1P49759 AC112693.2-201ENST00000556538 232 ntBASIC1.33□□□□□ -2.2
CLK1P49759 MIR548X2-201ENST00000579776 100 ntBASIC1.33□□□□□ -2.2
CLK1P49759 MIR3910-1-201ENST00000580936 111 ntBASIC1.33□□□□□ -2.2
CLK1P49759 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.32□□□□□ -2.2
CLK1P49759 RNU6-1084P-201ENST00000362498 107 ntBASIC1.32□□□□□ -2.2
CLK1P49759 RNU6-704P-201ENST00000364162 103 ntBASIC1.32□□□□□ -2.2
CLK1P49759 Y_RNA.242-201ENST00000364473 110 ntBASIC1.32□□□□□ -2.2
CLK1P49759 RNU6-163P-201ENST00000384396 106 ntBASIC1.32□□□□□ -2.2
CLK1P49759 Y_RNA.547-201ENST00000384654 119 ntBASIC1.32□□□□□ -2.2
CLK1P49759 MIR548O-201ENST00000408583 114 ntBASIC1.32□□□□□ -2.2
CLK1P49759 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.32□□□□□ -2.2
CLK1P49759 AC093850.1-201ENST00000454121 251 ntBASIC1.32□□□□□ -2.2
CLK1P49759 SNORA25.12-201ENST00000516202 82 ntBASIC1.32□□□□□ -2.2
CLK1P49759 AC090142.3-201ENST00000519012 385 ntBASIC1.32□□□□□ -2.2
CLK1P49759 MIR376A2-201ENST00000636782 80 ntBASIC1.32□□□□□ -2.2
CLK1P49759 MIR6844-201ENST00000637122 62 ntBASIC1.32□□□□□ -2.2
CLK1P49759 SNORA25.7-201ENST00000364375 127 ntBASIC1.31□□□□□ -2.2
CLK1P49759 Y_RNA.497-201ENST00000384447 98 ntBASIC1.31□□□□□ -2.2
CLK1P49759 MIR526A1-201ENST00000384897 85 ntBASIC1.31□□□□□ -2.2
CLK1P49759 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CLK1P49759 MIR764-201ENST00000390811 85 ntBASIC1.31□□□□□ -2.2
CLK1P49759 RNU6-938P-201ENST00000411285 103 ntBASIC1.31□□□□□ -2.2
CLK1P49759 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.31□□□□□ -2.2
CLK1P49759 RNU6-693P-201ENST00000516134 107 ntBASIC1.31□□□□□ -2.2
CLK1P49759 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
CLK1P49759 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.31□□□□□ -2.2
CLK1P49759 RNU6-1292P-201ENST00000383856 107 ntBASIC1.3□□□□□ -2.2
CLK1P49759 Y_RNA.542-201ENST00000384641 111 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR624-201ENST00000385217 97 ntBASIC1.3□□□□□ -2.2
CLK1P49759 SNORD37.2-201ENST00000391075 66 ntBASIC1.3□□□□□ -2.2
CLK1P49759 SNORD77.3-201ENST00000391113 65 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR891A-201ENST00000401237 79 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
CLK1P49759 RNU6-257P-201ENST00000410238 98 ntBASIC1.3□□□□□ -2.2
CLK1P49759 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
CLK1P49759 AF228730.3-201ENST00000436691 102 ntBASIC1.3□□□□□ -2.2
CLK1P49759 RNU4-57P-201ENST00000515980 135 ntBASIC1.3□□□□□ -2.2
CLK1P49759 RNU7-12P-201ENST00000516030 62 ntBASIC1.3□□□□□ -2.2
CLK1P49759 RNU6-830P-201ENST00000516353 107 ntBASIC1.3□□□□□ -2.2
CLK1P49759 RNU2-60P-201ENST00000517290 128 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
CLK1P49759 MIR3129-201ENST00000581095 76 ntBASIC1.3□□□□□ -2.2
CLK1P49759 AC012676.2-201ENST00000619258 186 ntBASIC1.3□□□□□ -2.2
CLK1P49759 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
CLK1P49759 RNU6-199P-201ENST00000362954 107 ntBASIC1.29□□□□□ -2.2
CLK1P49759 MIR802-201ENST00000390235 94 ntBASIC1.29□□□□□ -2.2
CLK1P49759 RNU6-482P-201ENST00000391068 107 ntBASIC1.29□□□□□ -2.2
CLK1P49759 Y_RNA.586-201ENST00000391146 98 ntBASIC1.29□□□□□ -2.2
CLK1P49759 RNU6-460P-201ENST00000391158 108 ntBASIC1.29□□□□□ -2.2
CLK1P49759 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
CLK1P49759 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
CLK1P49759 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.29□□□□□ -2.2
CLK1P49759 TMSB4XP3-201ENST00000445144 114 ntBASIC1.29□□□□□ -2.2
CLK1P49759 AL133373.1-201ENST00000497098 94 ntBASIC1.29□□□□□ -2.2
CLK1P49759 MIR4524B-201ENST00000581569 115 ntBASIC1.29□□□□□ -2.2
CLK1P49759 MIR6715A-201ENST00000615929 79 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms