Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MIR676-201ENST00000390702 67 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 RNA5SP482-201ENST00000391269 118 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.43□□□□□ -2.18
CACNA1FO60840 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.43□□□□□ -2.18
CACNA1FO60840 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.43□□□□□ -2.18
CACNA1FO60840 RNA5SP153-201ENST00000516498 76 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 SUB1P4-201ENST00000566062 339 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 MIR378D2-201ENST00000580636 98 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 AC005786.1-201ENST00000588553 154 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 U1.36-201ENST00000620684 176 ntBASIC1.43□□□□□ -2.18
CACNA1FO60840 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1FO60840 AC008834.1-201ENST00000511612 175 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 RNU7-128P-201ENST00000517247 62 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 IGKV1-22-201ENST00000524313 326 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 AC007751.1-201ENST00000529260 376 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
CACNA1FO60840 MIR4662B-201ENST00000579498 81 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 MIR3121-201ENST00000579680 77 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 MIR4762-201ENST00000585261 75 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 MIR6779-201ENST00000617283 64 ntBASIC1.42□□□□□ -2.18
CACNA1FO60840 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.42□□□□□ -2.18
CACNA1FO60840 RNA5SP276-201ENST00000362580 94 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 RNU6-1325P-201ENST00000364905 105 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 RNU6-1138P-201ENST00000365359 106 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 SNORD18B-201ENST00000365659 72 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 MIR539-201ENST00000365690 78 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 SNORD72-201ENST00000390994 80 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 AC099677.2-201ENST00000436385 175 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 NDUFA4P2-201ENST00000489989 244 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 AL359881.1-201ENST00000602916 267 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.41□□□□□ -2.18
CACNA1FO60840 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 SNORA33-201ENST00000363664 130 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 RNU6-309P-201ENST00000364573 106 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 Y_RNA.294-201ENST00000364916 102 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 SNORD113-1-201ENST00000365321 69 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CACNA1FO60840 MIR548O-201ENST00000408583 114 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 RNA5SP127-201ENST00000411051 133 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CACNA1FO60840 FTH1P12-201ENST00000432137 551 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
CACNA1FO60840 AC008267.6-201ENST00000441664 139 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 RNU6-971P-201ENST00000516920 106 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
CACNA1FO60840 AC097639.2-201ENST00000603159 172 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 U7.2-201ENST00000607576 63 ntBASIC1.41□□□□□ -2.18
CACNA1FO60840 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.41□□□□□ -2.18
CACNA1FO60840 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CACNA1FO60840 MIRLET7C-201ENST00000362160 84 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 Y_RNA.251-201ENST00000364551 99 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 SNORA75.5-201ENST00000391291 81 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 RNU7-197P-201ENST00000458836 62 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 RPS26P45-201ENST00000471748 340 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 RNU4-57P-201ENST00000515980 135 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 MIR6515-201ENST00000619843 57 ntBASIC1.4□□□□□ -2.19
CACNA1FO60840 MIR624-201ENST00000385217 97 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 Y_RNA.666-201ENST00000516187 112 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 RNU6-1299P-201ENST00000516316 100 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 RNU2-56P-201ENST00000516826 190 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 AC133485.4-201ENST00000561835 220 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 AC138907.4-201ENST00000570107 226 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.39□□□□□ -2.19
CACNA1FO60840 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CACNA1FO60840 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CACNA1FO60840 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1FO60840 Y_RNA.486-201ENST00000384398 107 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 SNORD37.2-201ENST00000391075 66 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 SNRPGP10-201ENST00000432323 225 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 Y_RNA.692-201ENST00000516627 105 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.39□□□□□ -2.19
CACNA1FO60840 MIR3129-201ENST00000581095 76 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 AC006441.5-201ENST00000612680 209 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.39□□□□□ -2.19
CACNA1FO60840 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.39□□□□□ -2.19
CACNA1FO60840 RNU6-1164P-201ENST00000364428 107 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 Y_RNA.525-201ENST00000384570 113 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CACNA1FO60840 snoU13.27-201ENST00000459278 104 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 AC008507.4-201ENST00000585464 127 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 MIR126-201ENST00000362291 85 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 MIR522-201ENST00000385071 87 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 SNORA40.5-201ENST00000391061 128 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 Y_RNA.621-201ENST00000411065 96 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 AC245047.4-201ENST00000433189 144 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 RN7SKP19-201ENST00000516016 252 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 RNU6-504P-201ENST00000516568 104 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 RNU2-60P-201ENST00000517290 128 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 TUG1_4.1-201ENST00000619464 181 ntBASIC1.38□□□□□ -2.19
CACNA1FO60840 MTND5P32-201ENST00000560711 1802 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 RNU6-508P-201ENST00000363231 103 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 SNORD50B-201ENST00000364995 70 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 MIR569-201ENST00000385228 96 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 RNU6-440P-201ENST00000390882 105 ntBASIC1.37□□□□□ -2.19
CACNA1FO60840 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms