Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR1262-201ENST00000408276 93 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 RN7SKP200-201ENST00000410564 320 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 AC004941.2-201ENST00000427009 228 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 AC099677.2-201ENST00000436385 175 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 MIR1270-201ENST00000459320 83 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 AC023141.11-201ENST00000508864 202 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 AC108729.3-201ENST00000513484 108 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 RNU6-1053P-201ENST00000515930 101 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
RFXAPO00287 MIR3683-201ENST00000580847 82 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
RFXAPO00287 MIR7157-201ENST00000635801 60 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
RFXAPO00287 Y_RNA.221-201ENST00000364248 96 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RNU6-813P-201ENST00000384691 107 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RNA5SP109-201ENST00000391010 116 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 Y_RNA.601-201ENST00000410500 113 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RNU2-63P-201ENST00000410792 194 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 ATP5J2P3-201ENST00000451550 258 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RPS23P4-201ENST00000487908 423 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RNU6-1258P-201ENST00000516911 111 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 Y_RNA.714-201ENST00000517065 90 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 MIR4777-201ENST00000583710 86 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 AC078899.2-201ENST00000595282 212 ntBASIC2.46□□□□□ -2.02
RFXAPO00287 RNU6-832P-201ENST00000363319 107 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 Y_RNA.155-201ENST00000363632 101 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 Y_RNA.171-201ENST00000363760 102 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 Y_RNA.190-201ENST00000363964 101 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 RNY1P1-201ENST00000364372 112 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 RNU6-402P-201ENST00000410678 103 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.45□□□□□ -2.02
RFXAPO00287 RPL39P39-201ENST00000455840 151 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 AC004812.1-201ENST00000540773 146 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.45□□□□□ -2.02
RFXAPO00287 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 AL356280.1-201ENST00000603614 379 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
RFXAPO00287 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
RFXAPO00287 Y_RNA.118-201ENST00000363300 101 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 Y_RNA.242-201ENST00000364473 110 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 SNORA68.1-201ENST00000364537 132 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 U8.13-201ENST00000390842 128 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 RNU6-679P-201ENST00000391003 106 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 POLR2J4-204ENST00000418424 324 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.44□□□□□ -2.02
RFXAPO00287 AC114811.1-201ENST00000507207 168 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 MIR4694-201ENST00000578534 80 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 AL355297.2-201ENST00000604792 129 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 AC022513.1-201ENST00000624512 117 ntBASIC2.44□□□□□ -2.02
RFXAPO00287 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.44□□□□□ -2.02
RFXAPO00287 SNORD115-19-201ENST00000363098 82 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 SNORD115-18-201ENST00000363293 82 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 RNU4-67P-201ENST00000364569 141 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 SNORD115-17-201ENST00000364612 82 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 SNORA4.2-201ENST00000365313 147 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 SNORA7.5-201ENST00000410672 110 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 AC245047.3-201ENST00000429428 127 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RFXAPO00287 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.43□□□□□ -2.02
RFXAPO00287 AC092881.1-201ENST00000638218 2733 ntBASIC2.43□□□□□ -2.02
RFXAPO00287 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFXAPO00287 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
RFXAPO00287 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFXAPO00287 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 RNU6-363P-201ENST00000362895 105 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 Y_RNA.241-201ENST00000364470 117 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 Y_RNA.244-201ENST00000364484 109 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 RNU6-1276P-201ENST00000365372 104 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 Y_RNA.467-201ENST00000384297 102 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 Y_RNA.507-201ENST00000384500 99 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 RNU1-101P-201ENST00000391171 127 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 RNU6-733P-201ENST00000410759 104 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.42□□□□□ -2.02
RFXAPO00287 STAG3L5P-204ENST00000443759 179 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 CYP2C59P-201ENST00000457790 269 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 SNORD59.2-201ENST00000516873 68 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 RNU7-181P-201ENST00000517234 74 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 AC090821.2-201ENST00000523552 176 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 AC021613.1-201ENST00000623880 111 ntBASIC2.42□□□□□ -2.02
RFXAPO00287 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.42□□□□□ -2.02
RFXAPO00287 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFXAPO00287 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFXAPO00287 MIRLET7C-201ENST00000362160 84 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 Y_RNA.336-201ENST00000365307 109 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 SNORA25B-201ENST00000365507 128 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 RNU6-675P-201ENST00000384236 104 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 SNORA27-201ENST00000384323 126 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 RNU6-616P-201ENST00000384353 107 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 HMGN2P35-201ENST00000412164 270 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms